Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151067g00012 ATGATTACTGTTAGTCAATCAGGAAATGCAAACTTCAAAACAGTTCAAAGTGCCATTGATTCTGTTCCCGATGGAAACTCTCAATGGATTCACGTCAAAATTTCCCCCGGTGTTTATAGAGAAAAGGTGACAATCACGAGCGGTAAACCATGCATATATCTTGAAGGAGGTGGCAGCGAATCCACGAGTATTGAATGGAATGACCACGGCAATGCACATTTCAGTGCTACTCTCCTCATTAAAGCCCCTAACATTGTTGCAAGGGGCATTGCCTTCAAGAACACATACAACACTGTAGAGACAAGCAAAGTGATTCAAGCAGTGGCAGCAAGGGCTCATCAGGACAAAATGGCTTTCTACGATTGTAAATTCATAGGGGTGCAGGATACCCTTTTTGATTCATATGGCCGCCATTATTACAAAAGTTGCTACATTCAAGGTGGAGTTGATTTCATCTTTGGGAGTGCTCAAACAATCTTTGAGGACAGCACCATATTTTACTCAATGGGACTTGGTCCCCAACTATATGGCGTTATGATAGGAAGCGAAAGGGAAAAAGATGACAGCAGTGGCTATGTCTTTAAAAATTGTAACTTCACTGGAATCAGAGGAAAAGCTACTCTTGGCAGATCTTTGAATGCTTATGGCAGAGTTATTATAGCCAATTCTGTGCTATCAGATGTTGTTCGACCAGAGGGTTGGGATTCTTTGAAAAATGATGTATCAAAGATAACGTTTGTGGAGGAGGGAAACACAGGGCCAGGAGCAAACAAATCTAAGCGTGTGCCATGGATGAAACACCTAAGTGGGTCTGAGCTTGATCACTTCTTGGACATGTCTTATATTGATAACGAAGGATGGATTGCTAATATTCCCTCGTTATGA 885 0.4181 MITVSQSGNANFKTVQSAIDSVPDGNSQWIHVKISPGVYREKVTITSGKPCIYLEGGGSESTSIEWNDHGNAHFSATLLIKAPNIVARGIAFKNTYNTVETSKVIQAVAARAHQDKMAFYDCKFIGVQDTLFDSYGRHYYKSCYIQGGVDFIFGSAQTIFEDSTIFYSMGLGPQLYGVMIGSEREKDDSSGYVFKNCNFTGIRGKATLGRSLNAYGRVIIANSVLSDVVRPEGWDSLKNDVSKITFVEEGNTGPGANKSKRVPWMKHLSGSELDHFLDMSYIDNEGWIANIPSL 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151067g00012 294 Gene3D - 1 293 IPR012334 -
Stsc151067g00012 294 Pfam Pectinesterase 2 282 IPR000070 GO:0030599|GO:0042545
Stsc151067g00012 294 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 289 - -
Stsc151067g00012 294 FunFam Pectinesterase 1 292 - -
Stsc151067g00012 294 SUPERFAMILY Pectin lyase-like 2 289 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151067g00012 Stsc-Chr151067 63890 65172 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151067g00012 2 238 Carbohydrate Esterase AT2G19150 48.548 4.92e-67 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151067g00012 - - adu:107492287 489.189