Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151067g00007 ATGGCTTATAATAAGAGTGGCCTTCTCCTCATTGTGACACTCTCCTCTATCCTCCTTGGCCATGCCTATAGACACCCAGCCGGGAAATCAATCTGGTTCACCGATCCAGCCCCCACCCCGGCCCCCAGCCCCGTCCCCAGCAACCCAGTCACCGACGTCCTCGGCGGCTTCGACATTAATAACATCAACTTGAATAACGTCAAGTCTGCCGTTGAAGAAGCAAAATCCAAGGTCCAGGTGGATGACTTCTGCACTGGCACCGAACACCCTGAGCTCTGTGCCCAAACCATTGCTCCATTATTCGTTGAAGGAGTATTCGATCCATTGAAGGCCCTTGAAGCTGAATTGGGCGCCACCCTTAACGAGACCTTGAAGGTTGTGGGCAAGATCGCTGAACTAGTGGAGGAGCCCGACACCTCAGTTGATGCAATGGATGCTCTGGACGTTTGCAGGGAGACCTACGACTACGCGGTTGATGCCATCAAGGAATCTATTGAACTGTTGAAGCAGATGAACATCGTTGATGCTTACCACAAGGTGAGCAGCATCAACAGTAACACTGCTACCTGCGATGATACTTTCGCTGAAACCGAGGCCACCAACCCTCTTCCCAGAGACGTTATTGATACTATCTTTAAGCTCACTGGAAACTGCTTGGCAATCTTGGATGGCTGGGTCAACAACCAAAACAAAATGTTTGTTTAA 705 0.5035 MAYNKSGLLLIVTLSSILLGHAYRHPAGKSIWFTDPAPTPAPSPVPSNPVTDVLGGFDINNINLNNVKSAVEEAKSKVQVDDFCTGTEHPELCAQTIAPLFVEGVFDPLKALEAELGATLNETLKVVGKIAELVEEPDTSVDAMDALDVCRETYDYAVDAIKESIELLKQMNIVDAYHKVSSINSNTATCDDTFAETEATNPLPRDVIDTIFKLTGNCLAILDGWVNNQNKMFV 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151067g00007 234 SMART PMEI_2 75 221 IPR006501 GO:0004857
Stsc151067g00007 234 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 80 223 IPR035513 -
Stsc151067g00007 234 CDD PMEI-like_2 79 221 - -
Stsc151067g00007 234 PANTHER PECTINESTERASE INHIBITOR-LIKE 21 220 - -
Stsc151067g00007 234 Pfam Plant invertase/pectin methylesterase inhibitor 80 221 IPR006501 GO:0004857
Stsc151067g00007 234 NCBIfam pectinesterase inhibitor domain 73 223 IPR006501 GO:0004857
Stsc151067g00007 234 Gene3D Invertase/pectin methylesterase inhibitor family protein 77 224 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151067g00007 Stsc-Chr151067 26835 27539 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151067g00007 61 232 Carbohydrate Esterase AT3G05610 24.444 5.76e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151067g00007 - - ahf:112756681 198.749