Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151067g00003 ATGATGAATGATATTATGGAAGCCAATGTATCCACTAAACTTGAATCAGAAGAAGCTTTTGAGGACCTCAAATCATCAGAGACTCAGCCATCTAAGAAAAGGAAAACGGTTGAGAAAACTGTTGTGAGGGTGAGGATAGGAGAAGGAAACAATATCAGCAGATTGAAGAATGAAGGGCTACCTTCAGATTTTTGGTCTTGGAGGAAATATGGACAAAAGCCAATCAAAGGATCTCCATATCCAAGGGGCTATTACAGATGCAGCACATCAAAGGGGTGTTTAGCGAAGAAGCAAGTAGAGAGATGCAGGACAGATGCCTCAATGCTCATAATCACATACTCCTCTACACATAACCACCCTTCTCCTGATGAAATCATCTCCACTGCAAATTTATCACAGAAACCAAAAGAACAAGAAACTGAAGAAACCACAGAAGAACAAGACCTCTCAAAGGTGGAAGCACAAGAACAAGAACAAGAACATGAGCAGGTTGAAGAAGAAAACAAGGATCATGACAAGCCTAGTAGTACTAGTGTGTCTGTGGCCACAGGTGATGAGAAGAGTTTCCATTACTTGCAATCTCCAATACACAGCAGCCATGAAGAGATTATTGTTACAGATCAAGAAGATCCATTCAAGCTAATAAGCACTGATCAGAAAAGCAATGAAAGAATAGATGTTTTGTTAGAAGAGGAAGAGCAGCAGCCACTATGCTATGCACAGATCAAGAACTTGACAACAACAACTTCAGAAGAACTTGATTTCTTCGATGAGCTTGAGGAGTTGCCCATGTCTTCATCTTTCTTGCACTTCACGAGGAGCATTTTATCCAATGAAAGGATTCCCGTTTTTCCTTCTTGA 861 0.4053 MMNDIMEANVSTKLESEEAFEDLKSSETQPSKKRKTVEKTVVRVRIGEGNNISRLKNEGLPSDFWSWRKYGQKPIKGSPYPRGYYRCSTSKGCLAKKQVERCRTDASMLIITYSSTHNHPSPDEIISTANLSQKPKEQETEETTEEQDLSKVEAQEQEQEHEQVEEENKDHDKPSSTSVSVATGDEKSFHYLQSPIHSSHEEIIVTDQEDPFKLISTDQKSNERIDVLLEEEEQQPLCYAQIKNLTTTTSEELDFFDELEELPMSSSFLHFTRSILSNERIPVFPS 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151067g00003 286 MobiDBLite consensus disorder prediction 114 181 - -
Stsc151067g00003 286 Pfam WRKY DNA -binding domain 63 120 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151067g00003 286 ProSiteProfiles WRKY domain profile. 56 122 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151067g00003 286 MobiDBLite consensus disorder prediction 114 134 - -
Stsc151067g00003 286 MobiDBLite consensus disorder prediction 135 174 - -
Stsc151067g00003 286 SMART WRKY_cls 61 121 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc151067g00003 286 SUPERFAMILY WRKY DNA-binding domain 57 122 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc151067g00003 286 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 21 267 IPR044810 GO:0003700
Stsc151067g00003 286 FunFam WRKY transcription factor 65 48 122 - -
Stsc151067g00003 286 Gene3D WRKY domain 48 123 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc151067g00003 286 Coils Coil 147 169 - -
Stsc151067g00003 286 MobiDBLite consensus disorder prediction 15 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151067g00003 Stsc-Chr151067 10359 12259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151067g00003 26 143 WRKY Transcription Factor Family AT4G01250 55.462 1.12e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc151067g00003 WRKY 3.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151067g00003 - - adu:107492378 416.387