Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151067g00001 ATGGGGTTTAATCAGCCTCTTTCCTCGACATCATTCAATTTCTCTGGATTCCAAGGCGGTTATGGTTCTGTTAATGTTCAAGATGTGGAGGCTGTGTTACAAAATAAGCAAAGTTTCTCAGCAATAATGGAGTTAGATAATGATGGAGGAGATAATTTGTTCAATGATCAAACCCAGCAGCATCAGCAACATGATCATGATGATAATGTCAAAGTTGATGGCATGATCTTAGAAAATATCAATTTTGCCCCGGATGGTGATGGTCTTCAACAAATTTCACAAGAGTTTCAAGAAACATCATCTTTGGCAATAGCATCATTGGAGCTCTTGAGAAACTACGAAAGCAAGTTCAAGAAGCTAAGCGGGGAAAACATAAGCGACAACTTCAGCTATGACATCATGGAGACTAGTACTTGTTCGGAGAATCAAAGATTGTCAACTGAAGAAATCATGAGAGTTGCAGGGGCAAGGTATGTCCATTACTCTGCACATTGGAATAATGATGATTTCAGCATTCCCACGCACCATTATGGATTGGATACTGGAAACTTGTCCGAACAAGAGAATAGAGATGTGGAGCTTGCTCAGTTTCTACTGGCTGCTGCAGAGAGAGTAGGGTGCCAGCAATTCGAACGCGCCAGCCGCTTACTCCTCCATTGCCAATGTAATTCAGATGTCAATGCAAACGCTGCTCAGAGGGTTATCTTTCATTTCTCAGAAGCCCTTCGTGAAAGGATCAATAAAGAAACTGGAAGGACAGAAGTAGGAATAACGTCTTCATATAACGAAAATCAAGAAACTGAAATGCTTCAAAAGATGAGTATCAATGGATCCCTTAATTGTCATCAGAAAATGCCTTTCAACCAAGTAATGCAATTCACTGGTGTACAAACTATGGTGGAACATCTTGCTTCTGAGACCAAGATACACTTGATAGATCTTGATATCAAAAGTGGAGTGCAGTGTACGGCTCTGATGCAAGCGCTGGCAGAGCGGAAAGAGTCTTGTGTGGAGTCTCTAAAGGTATCTGCCATTGGAACTTGCACTTACAAGAACAAAATTGAAGATACAGGACAAAGGTTAACATGTTTTGCTGAGTCGCTAAACTTGCCTTTTTCATATAAGGCGGTTATTGTAACAGATTTAGCAGAAATCAAGTTGGATGATTTTGATGTGGATGACGATGAAGCGGTTGCTGTGTACTCTCCTTATTTTCTGAGGACTCTGATATCAAGAACTAATTGCTTGGAAAATCTGATGCTAGTTATAAGGAATATCAAGCCCTCTATTATGATAGTGCTGGAAATAGACTCAAATCATAACTCGCCTTCTTTTGTGAACCGATTCATTGAAACGTTGTTCTACTGTTCAGCATTCTTTGATTGTATTGAAACTTGCCTGCAAGAAGATAGTGAGAGCAGAATGGCAGTGGAAATAGTGTGTTCCGTTGGAATAAGAAACATTGTTGCTGCTGAAGGTACAGAAAGGACGGTTAGGAATGTGAAGTTGGATGTTTGGAGAAGGTTCTTCGCCAGGTATCGAATGGTGGAAACTGGGTTCAGTGAGTCATCGCTTTATCAAGCTAACTTGGTTGCTAGAGAGTTTTGTTTTAGCAAATTCTGCAGCGTGGATAAAAATGGTGAGAGTCTAATAATTTCATGGAAGGGAACTCCAATGCATTCACTCTCAGCTTGGAGGTTTGTATGA 1707 0.4048 MGFNQPLSSTSFNFSGFQGGYGSVNVQDVEAVLQNKQSFSAIMELDNDGGDNLFNDQTQQHQQHDHDDNVKVDGMILENINFAPDGDGLQQISQEFQETSSLAIASLELLRNYESKFKKLSGENISDNFSYDIMETSTCSENQRLSTEEIMRVAGARYVHYSAHWNNDDFSIPTHHYGLDTGNLSEQENRDVELAQFLLAAAERVGCQQFERASRLLLHCQCNSDVNANAAQRVIFHFSEALRERINKETGRTEVGITSSYNENQETEMLQKMSINGSLNCHQKMPFNQVMQFTGVQTMVEHLASETKIHLIDLDIKSGVQCTALMQALAERKESCVESLKVSAIGTCTYKNKIEDTGQRLTCFAESLNLPFSYKAVIVTDLAEIKLDDFDVDDDEAVAVYSPYFLRTLISRTNCLENLMLVIRNIKPSIMIVLEIDSNHNSPSFVNRFIETLFYCSAFFDCIETCLQEDSESRMAVEIVCSVGIRNIVAAEGTERTVRNVKLDVWRRFFARYRMVETGFSESSLYQANLVAREFCFSKFCSVDKNGESLIISWKGTPMHSLSAWRFV 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151067g00001 568 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 143 555 IPR005202 -
Stsc151067g00001 568 ProSiteProfiles GRAS family profile. 185 566 IPR005202 -
Stsc151067g00001 568 Pfam GRAS domain family 195 566 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151067g00001 Stsc-Chr151067 943 2649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151067g00001 184 567 GRAS Transcription Factor Family AT1G66350 28.831 1.08e-46 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc151067g00001 GRAS 2.7e-78 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151067g00001 - - ahf:112695737 865.144