Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151066g00003 ATGGGTAATGGAACTTCTCGCGTTTTTAGCTGTTTGGTGCCGTATAACGGCAAGAATGGGGTTGATTTGGAGTTCTTGGAGCCATTAGATGAAGGTTTGGGCCACTCTTTTTGTTATGTGAGGCCATCCATTTTCGAATCTCCTGCTATTACCCCATCCAATTCTGAGAGGTTTACACTAGATTCTAGCATCCTTGATTCGGAGACACTGAGTGGGTCGTTTAGGAATGATGGCATTGAAGATTCTTCTGCCACACACAAGCCAGGGAAGAACCTACCTGAAACCACATTCAAAACAATCTCAGGGGCTTCGGTCAGTGCCAATGTTTCAACCGCCAGGACCGGTAACCAGAATGCACTACTTGCTAGTAATTTCTTAGAACCTGCTGCCTCCTTTGAGGGAACTGCCTCATTTGCTGCAATCCCTTTGCAGCCTGTTCCCCGTGGCTCTGGACCTTTGAATGGCTTCATGTCTGGACCTTTGGAAAGGGGTTTTGCCTCTGGACCTTTGGATAAGGGTGGTGGTTTCATGTCTGGGCCAATGGAGAAGGGAGTTATGTCGGGTCCTCTTGATGCCACTGACAAATCCAACTTTTCAGCACCACTTGCTCGTGGTCGCCGAAGGCCTCACCTTCACCGCCTGATGAGAAGTTGGGCTCATGGCAAGGCTGGTGAAGATAGGGTGCATGTTGTTCTTTCTGAAGAACAAGGGTGGTTGTTTATTGGGATATATGATGGTTTTAGTGGACCAGATGCACCTGATTTTCTGATGAGCAATCTTTATAGGTTTATAGACAAGGAATTAGAGGGATTGCTTTGGCATTATGAATATCATCCAGTTGATCTACTTGAACCTGAAGTCCATAAAGGAGAAAATACAATGGTTCCTCCAGAATGCAAAAGAGAGGAAACGTCAGATAGTTCTTGCTGTTTGGAAAATTCTTGTCCAGTTAAGGTCAAGGATCAGTCATCTAACTGTGAGATAGTGGAGGAAAACACTGACACTAAGGTGAATGCGAAACAGCTTAATTGTGGAAGTCCTAGTTTCTCCCGATTGGCTGGTCAAGGTAGAAAAAGCATGAAACTTTATGAGCTACTTCAGATAGAATCTTGGGATGAACAGGGTTTTTTGTCAGTCTCAGAGCAAGGTAAGGATTCTTCCATTGCTAGGGAAGTAACACAAGAAGATAAACCTAGACAGCAGGATGAAGGCCCTACTACATCTGGAGAAAACCGGGGCATGGGGTTTAGTTCAACTAAACAGGTGCCTGTTGCTTCTTTTTCTGTTAAAGGAGAAAGGCAGGATCCGAGAAAATCGTATATCAGTATGAAAATCAGAAATATGTACAGGAAGCAGAAGTCCGTGCGCAAAAACCTCTTTCCTTGGAATTATGATTGGCATAGGGAAGAAACCTGTGTTGACAAGAAAATAGTAGAAACCTTGAGGCCTATTAGAAAATGCAAGTCTGGAGTAGATCATAATGCAGTTTTAAGAGCAATGGCACAAGCTCTTGAAAGAACAGAAGAAGCATACATGGACATGGTTGAGAATAATCTAGATAAAAATCCAGAGCTTGCCTTAATGGGATCCTGTGTTTTAGTGATGTTAATGAAGGATCAGGATGTTTATGTAATGAATGTTGGAGACAGCCGTGCAATTTTGGCACAAGAAAGACCAAATGATCGTCATCCCAATCCAAGCTTCATCAAGGATGACGTGAGCCATAGAAATCGATCAAGAGAGTCATTAGTTGGCATGGAGCTGGATAGAATTTCAGAGGAGTCTCCAATGCACAACATAAACTGCCGTCTTAACATGATGAACAAAAACAGAGAGATATCCCTTTGTGGACTGAAAATGAGGGCTGTTCAGCTTTCAACAGATCACAGCACAAGTATTGAAGAGGAAGTGCTTAGAATAAGAGCAGAACACCCAGAAGATAATCAAGCCATATTCAATGATAGAGTGAAAGGACAATTAAAAGTCACCAGAGCATTTGGTGCCGGATTCCTGAAGAGGCCATCTTTCAATGAACCTCTGCTGGAGAGGTTTCGAGTTGATTTTGTGGGCAATGCTCCTTACCTAAGTTGCACATCTTCCGTCGTTCATCATCGGCTTTGCTCAAGTGATCGGTTCTTGGTACTATCCTCCGATGGGCTTTACCAATATTTCAGCAATGAAGAAGTAGTTGCCCATGTTACATGGTTCATGGAAAATGTCCCCGGTGGCGATCCTGCTCAATATCTTATCGCGGAGCTTCTTCTCCGTGCTGCTAAGAAGAATGGAATGGATTTTCATGAATTGCTTGATATTCCTCATGGAGATAGGCGTAAATATCATGATGATGTATCTGTAATGGTGGTTTCTTTGGAGGGAAGAATATGGAGATCATCGGGATAA 2400 0.4333 MGNGTSRVFSCLVPYNGKNGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERFTLDSSILDSETLSGSFRNDGIEDSSATHKPGKNLPETTFKTISGASVSANVSTARTGNQNALLASNFLEPAASFEGTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDKGGGFMSGPMEKGVMSGPLDATDKSNFSAPLARGRRRPHLHRLMRSWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSNLYRFIDKELEGLLWHYEYHPVDLLEPEVHKGENTMVPPECKREETSDSSCCLENSCPVKVKDQSSNCEIVEENTDTKVNAKQLNCGSPSFSRLAGQGRKSMKLYELLQIESWDEQGFLSVSEQGKDSSIAREVTQEDKPRQQDEGPTTSGENRGMGFSSTKQVPVASFSVKGERQDPRKSYISMKIRNMYRKQKSVRKNLFPWNYDWHREETCVDKKIVETLRPIRKCKSGVDHNAVLRAMAQALERTEEAYMDMVENNLDKNPELALMGSCVLVMLMKDQDVYVMNVGDSRAILAQERPNDRHPNPSFIKDDVSHRNRSRESLVGMELDRISEESPMHNINCRLNMMNKNREISLCGLKMRAVQLSTDHSTSIEEEVLRIRAEHPEDNQAIFNDRVKGQLKVTRAFGAGFLKRPSFNEPLLERFRVDFVGNAPYLSCTSSVVHHRLCSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPGGDPAQYLIAELLLRAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151066g00003 799 Coils Coil 497 517 - -
Stsc151066g00003 799 SMART PP2C_4 209 788 IPR001932 -
Stsc151066g00003 799 Gene3D - 192 354 IPR036457 -
Stsc151066g00003 799 Pfam Protein phosphatase 2C 615 762 IPR001932 -
Stsc151066g00003 799 Pfam Protein phosphatase 2C 501 559 IPR001932 -
Stsc151066g00003 799 ProSiteProfiles PPM-type phosphatase domain profile. 209 790 IPR001932 -
Stsc151066g00003 799 Gene3D - 429 796 IPR036457 -
Stsc151066g00003 799 PANTHER PROTEIN PHOSPHATASE 2C 199 789 IPR015655 GO:0004722|GO:0006470
Stsc151066g00003 799 MobiDBLite consensus disorder prediction 404 425 - -
Stsc151066g00003 799 MobiDBLite consensus disorder prediction 379 433 - -
Stsc151066g00003 799 CDD PP2Cc 496 790 IPR001932 -
Stsc151066g00003 799 MobiDBLite consensus disorder prediction 388 403 - -
Stsc151066g00003 799 SUPERFAMILY PP2C-like 221 791 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151066g00003 Stsc-Chr151066 19574 23813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151066g00003 1 799 PP2C-type Phosphatase Gene Family AT2G46920 61.910 0.0 991
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151066g00003 - - gmx:100786856 1229.93