Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151064g00023 ATGGCTTCAGCAGTTCTAACTGGAGCTGTTCTGCCTTCCATTTTTAATGTTGTTTTTGACAGGCTGTCCTCACCTGAATTTGCCAACTGGATCAAAGGGAAGAAGCTTACCCAGAATATGCTTGAAAGGCTGAAGACTAATCTTTATGCTGTTCAAGCCTTTCTCATTGATGCTGAGCAGAAGCAGATCAAGGAGAGAGCTGTCAAGGACTGGCTTAATAGTCTGAAAGATGCTATGTATGTTGCCGATGACTTGTTGGATGAAGTCTTCACCAAAGCTGCCACTCAGAAGGATCCAGGTACCTTCTTCTCTCGTTTTCTCAATTTGCAAGATAGGGAGATAGCAAGCAGGATGGAGGACATAACTGATAGGATAGAGTCTATTGTTAAACAAAAAGACACTCTTGGTAGGGAGGAAGACAAGGAGGTCATAGTGAAATTGTTGTTGGATGATCTTGACACCGATGATGGTGATACGCCTGTGATTCCCATTGTGGGCATGGGTGGAATAGGAAAGACTACTTTAGCCCAGTTCGTTTACAATGATGACAAAGTGAAGGAGAATTTTGATTTTCGAGGTTGGGTTTGCGTGTCAGAAGAGTTTGATGTTGTCAAGGTCACAAAGACTATAATTGAGGCAGTAACTTCGAGCTCTTGCAACTTGAATGATTTGAATTTACTTCAACATGAATTAAAGGAAAAGTTGTCAAGAAGGAAATTCTTTGTTGTCTTGGACGATGCATGGAATGAGGATTATGAAGATTGGAAGAGGCTTCTAAAACCTTTTCAAAATGGGGTTAAGGGAAGTAAAATTCTCATAACTACTAGAAGTAAAACGGTGGCTTCTGTGGTGCAGACTGTTTCACCTCATGAACTAAGTTTATTGTCTGATGAAGATTGTTGGTTAGTGTTTTCAAAACATGCACGTCTTTCCACTGACTCCATGGAATATCCAACTCTGGAAAAGGTCGGCAGAGATATTGTAAAGAAGTGTGATGGCTTGCCCTTGGCAGCTCAAGCCCTCGGAGGTTTATTACGTGGAAATTCTGACGTGAAGTAA 1059 0.4136 MASAVLTGAVLPSIFNVVFDRLSSPEFANWIKGKKLTQNMLERLKTNLYAVQAFLIDAEQKQIKERAVKDWLNSLKDAMYVADDLLDEVFTKAATQKDPGTFFSRFLNLQDREIASRMEDITDRIESIVKQKDTLGREEDKEVIVKLLLDDLDTDDGDTPVIPIVGMGGIGKTTLAQFVYNDDKVKENFDFRGWVCVSEEFDVVKVTKTIIEAVTSSSCNLNDLNLLQHELKEKLSRRKFFVVLDDAWNEDYEDWKRLLKPFQNGVKGSKILITTRSKTVASVVQTVSPHELSLLSDEDCWLVFSKHARLSTDSMEYPTLEKVGRDIVKKCDGLPLAAQALGGLLRGNSDVK 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151064g00023 352 Pfam NB-ARC domain 146 346 IPR002182 GO:0043531
Stsc151064g00023 352 Gene3D - 115 288 IPR027417 -
Stsc151064g00023 352 Gene3D - 294 352 IPR042197 -
Stsc151064g00023 352 PANTHER DISEASE RESISTANCE PROTEIN RP 41 349 IPR044974 GO:0006952
Stsc151064g00023 352 Pfam Rx N-terminal domain 14 99 IPR041118 -
Stsc151064g00023 352 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 347 IPR027417 -
Stsc151064g00023 352 PRINTS Disease resistance protein signature 331 345 - -
Stsc151064g00023 352 PRINTS Disease resistance protein signature 161 176 - -
Stsc151064g00023 352 PRINTS Disease resistance protein signature 234 248 - -
Stsc151064g00023 352 FunFam Probable disease resistance protein At1g61300 116 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151064g00023 Stsc-Chr151064 182537 183595 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151064g00023 158 347 WRKY Transcription Factor Family AT5G45050 26.633 1.04e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151064g00023 - - ahf:112756716 551.206