Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151064g00015 ATGGCTGCAAAACTTTATGGTGGAGCTTATCTCTCTTCCTTTGTTGATGCTCTTTTAGAGAAGCTGCCTTCATTGCTCGAAGACGACGACTCATCATTGGTGGAAAGGAACAACTTGCTTAAAAGGTTGGAGAAAAGTCTATATGATGTTGGAGCTGTCCTTGATGATGCTGAGCAGAAGCAGTTCACTGTCAAGAAACTCAAGGATTGGCTTGTTGATCTCCAAGATGCTCTCTATTTCGCTGATGACTTGCTCGATCAACTCTCCGCAGCAGCTGCCACTGCCACTCCAAGGGATCCAGGTATCTCGGCTTCCTGTTCTCGTCTTGTTGATTCATATATTGAGGATAGTGTTGGCTGTATCAAAAAAGTAGTTGGCAAAGTAGAGTCTCTTGTAGCACGCAAAAACTATCTTCGTCTTAAAGAGTCCACCGAGGTGGACATGTCATCATGGAGAACTCCATCCACATCTCTGGTTGTAAGTTCCGACATATATGGTCGGGACAAAGACAAGGAGGAGATAATGAAATTGGTGTTAGCTGATACTTGTCATGCTGAATCACCTTTTACTGTGATCCCAATTTGGGGTATGGGTGGAATAGGAAAAACTACCTTGGCTCAACTGGTTTACAGTGATGCCAAAGTGGTGGAAAAATTTGACATTAGAGTGTGGGTTTGTGTAGCTGAAAATTCCGATCCTGTTCATGTTTCAAGGACAATAATAGGGGCAATGGATCCTTGTTCCTTTAGCATGGACAATTTTGATGTTCTTCAGACTAATTTGAAGAACAAGTTGATAGGAAAGAAATTCTTAGTTGTTTTAGACGATGTCTGGCATGGTGAACGAGACACATGGGAGAATCTTCTAAAACCTTTTCAATTTGGGAATAATGGAAGTAAAATTTTATTAACAACCCGTAGTGAAAAGCTTGCTTCTATGTTCGTAGCTACTAGTCAACATTATCGATTAGGTTTATTGTCCGGCGAAGGTTGTTGGTCACTATTTTTGAAGCATTCGTCTATTTCTACTAATTTAGAACAACATGCAACTCTAGAACCAATTGGTAGAAATATTGTTGAAAAGTGTAAGGGATTACCTTTGGCCGTAAAGACACTTGGAGGTTTATTGCACAAGAAGTGTGACGTAGCGGATTGGAAGAAAATACTTGAAAGTGAAATTTGGGAGCTCCCGGAAGATGAAAGTAAGATAGTTCCCGCACTAAGAGTAAGTTATCACTACCTCCCTTCACATTTAAAGAGATGTTTTGTGTATTGCTCATTATACCCGAAAGATTATCAATTTGACAAAGATGAATTAATCTTGCTATGGATGGCTGAAGATCTCTTACGACCAATGTTAAACAACACATTGGAAAACATTGGTTCTGTATATTTTGATGAATTAGTTGCTAGGTCATTTTTACAACCTTCCACTGCTTACGCTAGGTCTGGGTTATTTGTAATTCATGATCTCATGCATGATCTAGCAACGTTTTTTGCTGGAAAATTCTTTTTCAAAGAATTTGACATTCCACGCATGGTTGACAGCAAAACTCGTCATTTGTCATGTGATTGGGATCAAATCTCAAGATTTCCAGAGGCCTATGATGGAGCAATATATATGAGAACATTTTTATGTGTTGCTGATGTTAAATCAAATGATATCAAAAGTGATTTTTGGCTAAAAGAATTAAGGCGTTTGAGAGTTTTGGCATTTCAAAACTGTGAAATCAGGTCGTTGCCTGATTCAATAGATGAATTGATTTATTTGCGTTATTTGAATCTCTCTGAAACACCTATTGTCACATTGCCTGAATCATTGTGTAAATTATACAATCTCCAAACCTTGAAGTTGAGAGATTGTGATAAGCTTGAAATGCTTCCAAGCCAAATGCAAAATCTTGTAAACCTGCGCCACCTTGATATCAGAGGAACTTATGATTTGAAACAAATGCCAAAGGGAATGAGCAAGTTAAAGCATTTGAATTTATTTGGATACTATATTGTGGGGGAGCATGAAGAGAATGGGATAAGAGAATTGGGACCAATTGATGTTCATGCCTCATTTCGCATTTCCGAATTAGAGAATGTGAACAACAGCAGCGAAGCTTTGGAGGCAAAGATGGGAAACAAGAAGCACATCAACATTTTAGAATTGGAATGGCTTTCAGATGGTGATACTGTGGATGTTGAAACTGAAAGAGATATACTTAAAGAGTTACAACCACATGAAAACTTGAAGGAGCTAACAATTTATGGTTATAGGGGTGAATTGTTCCCCGATTGGTTAGGCCTTTCCTACTACTCCAATATAACCAAATTGAGAATGGAGGGTTGTAAGAGTTGTCATCGGCTTCCTTCGCTTGGACAGTTACCCTCTTTACAGCATCTGGAGATTATTAAACTGCATGGGTTGGAGAGAATTGGTGAGGAGTTTTACAAGAACGCTGCATCATGTCATGAGGGGACGCCCTTCAGATCTCTTGAAAAGCTTGAATTTCGTAGCATGGATGGTTGGCGAGAGTGGCATATTCCTGATAAGTTGGATGTATTTCCTAAACTTAAAACCCTTATAATGAACAACTGTCCGGCGTTAAGTGGAGATCTGTCTGCTTGCTTTCCGGCTCTGGAGCAACTTAGAATTTGTGATTGCGAAGAGCTTACATATTCGCAGCTGAGAGCTCCGAAGCTTCACACGATAAATTTAAACGGTTGGCAGAATTCTATGACAATGGCGAAACTGCACGAGGTAAGAATTGAACACACTAAGCAGGTGCACTCCGTATTGGAGTTACTTCGTCACATCCAACCACCTTGTTTCCAACGTTTGATCATTGAAGATTGTGGGTCAGCAATATCAATTTTGGGAGATTATTTGCCCACTTCATTACAATATCTGCAAATCTCCAGGTGTTCAAAATTAAAATTCCCAGAGCCACTGGAACACAAGTTGCTAAGGGAGATACATGTGGACAAGTGTGATTCAGTGACGTTGTTTCCATTGGGGGCCCTTCCAAATCTCAAGAAACTCGAAATTTCAAATTGCCGCCGTCTAGTATCCTTACCGCCTCTAGGCTTTGCTGCGCCCCACCTAGAAGATCTGTATATAGGATATTGCCCAGAAATTGATTGTTTTGGAGAGGAGTGCCTCTCACCGAGCTTGACAACTCTTCGGATCTCTAATTGCCAGAAACTAGAGAGGTGGATAGCACCCAATGGTTTTCACAACAGTGAATGGCTTACCGATCTTAGCCTTATAGACTGGAATGAAGTTAAGTCCTTCCCAACAGAGGGTTACCTTCCTTCTTCCTTTCGGTCTCTATATTTGTCTTCCTTTCCACATCTGAAGACGCTAGACTGCAAGGGCCTTCACCATCTCACCTCCCTCCAACAATTAATAATTGAAGTGTGTCCAAAGCTGGATAATGTCACGGAAGAAAGGCTGCCTGCCTCCTTATCAAAACTCCACCTCCTTTGA 3477 0.4044 MAAKLYGGAYLSSFVDALLEKLPSLLEDDDSSLVERNNLLKRLEKSLYDVGAVLDDAEQKQFTVKKLKDWLVDLQDALYFADDLLDQLSAAAATATPRDPGISASCSRLVDSYIEDSVGCIKKVVGKVESLVARKNYLRLKESTEVDMSSWRTPSTSLVVSSDIYGRDKDKEEIMKLVLADTCHAESPFTVIPIWGMGGIGKTTLAQLVYSDAKVVEKFDIRVWVCVAENSDPVHVSRTIIGAMDPCSFSMDNFDVLQTNLKNKLIGKKFLVVLDDVWHGERDTWENLLKPFQFGNNGSKILLTTRSEKLASMFVATSQHYRLGLLSGEGCWSLFLKHSSISTNLEQHATLEPIGRNIVEKCKGLPLAVKTLGGLLHKKCDVADWKKILESEIWELPEDESKIVPALRVSYHYLPSHLKRCFVYCSLYPKDYQFDKDELILLWMAEDLLRPMLNNTLENIGSVYFDELVARSFLQPSTAYARSGLFVIHDLMHDLATFFAGKFFFKEFDIPRMVDSKTRHLSCDWDQISRFPEAYDGAIYMRTFLCVADVKSNDIKSDFWLKELRRLRVLAFQNCEIRSLPDSIDELIYLRYLNLSETPIVTLPESLCKLYNLQTLKLRDCDKLEMLPSQMQNLVNLRHLDIRGTYDLKQMPKGMSKLKHLNLFGYYIVGEHEENGIRELGPIDVHASFRISELENVNNSSEALEAKMGNKKHINILELEWLSDGDTVDVETERDILKELQPHENLKELTIYGYRGELFPDWLGLSYYSNITKLRMEGCKSCHRLPSLGQLPSLQHLEIIKLHGLERIGEEFYKNAASCHEGTPFRSLEKLEFRSMDGWREWHIPDKLDVFPKLKTLIMNNCPALSGDLSACFPALEQLRICDCEELTYSQLRAPKLHTINLNGWQNSMTMAKLHEVRIEHTKQVHSVLELLRHIQPPCFQRLIIEDCGSAISILGDYLPTSLQYLQISRCSKLKFPEPLEHKLLREIHVDKCDSVTLFPLGALPNLKKLEISNCRRLVSLPPLGFAAPHLEDLYIGYCPEIDCFGEECLSPSLTTLRISNCQKLERWIAPNGFHNSEWLTDLSLIDWNEVKSFPTEGYLPSSFRSLYLSSFPHLKTLDCKGLHHLTSLQQLIIEVCPKLDNVTEERLPASLSKLHLL 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151064g00015 1158 Gene3D - 410 497 IPR036388 -
Stsc151064g00015 1158 FunFam Probable disease resistance protein At1g63360 411 498 - -
Stsc151064g00015 1158 Coils Coil 1158 1158 - -
Stsc151064g00015 1158 Gene3D - 15 133 - -
Stsc151064g00015 1158 Gene3D - 148 319 IPR027417 -
Stsc151064g00015 1158 Gene3D Ribonuclease Inhibitor 538 936 IPR032675 -
Stsc151064g00015 1158 Gene3D Ribonuclease Inhibitor 941 1049 IPR032675 -
Stsc151064g00015 1158 SUPERFAMILY RNI-like 841 1156 - -
Stsc151064g00015 1158 PANTHER DISEASE RESISTANCE PROTEIN RP 42 965 IPR044974 GO:0006952
Stsc151064g00015 1158 Pfam NB-ARC domain 187 391 IPR002182 GO:0043531
Stsc151064g00015 1158 Pfam Rx N-terminal domain 14 93 IPR041118 -
Stsc151064g00015 1158 PRINTS Disease resistance protein signature 264 278 - -
Stsc151064g00015 1158 PRINTS Disease resistance protein signature 362 376 - -
Stsc151064g00015 1158 PRINTS Disease resistance protein signature 1002 1018 - -
Stsc151064g00015 1158 PRINTS Disease resistance protein signature 191 206 - -
Stsc151064g00015 1158 SUPERFAMILY L domain-like 488 904 - -
Stsc151064g00015 1158 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 425 IPR027417 -
Stsc151064g00015 1158 Gene3D - 326 409 IPR042197 -
Stsc151064g00015 1158 Gene3D Ribonuclease Inhibitor 1050 1158 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151064g00015 Stsc-Chr151064 124962 129362 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151064g00015 192 669 WRKY Transcription Factor Family AT5G45050 22.160 1.89e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151064g00015 - - ahf:112709990 1286.55