Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151064g00012 ATGATAGACCAGGAAGTGAAGAAATGGCTCGTTGATCTCCAAGATGCTCTCTATATGGCGGATGACTTGCTGGATGAACTCTCCACTAAAGCTGCCATTTCCACTCCTACCTCCACTCCAAGCGATCCTGGTAACTATTCTTCCCATTGTCGCTCTATTGTTAATTCAATCCTGGAAGATAGTGATCATGAGATGAGGGTGGTAGATAGCATGCGAGATATAGTTGATAAGCTAGAGTCTATTGTTGAAGAGAAAGATGATCTTGGTCTAAAACAAGAGCTTGTCGAAGATCCAGAGGGAATGTCATGGAGAGTTCAATCATCGCTGCTCGAAAGCTTTGATATATATGGCAGGGAAGATGACAAGGAGGCCATAATTGGATTCTTGTTAGATGACACCCGCGATGATAAACTCTCTGTGATCTCTGTAGAAGGCATAGGTGGAGTTGGAAAAACTACTTTGGCTCAGTTTGTTTACAATGATGCCAAGGTGGAGGGGAAATTTAACCTTAGAGCCTGGGTGTGTGTCGCTACAACATTTGATCCTGTTAATGTTACAAAGGCTATAATAGAGGACATAACTTCTTCACCTTGCAACCTGGTTAACTTGAATTCACTTCAAACTGAATTGAAGAAAAAGTTAACAGATAAAACATTCTTAATTGTCTTAGATGATGTTTGGAATAATCGGCAACATTTGTGGGACAATTTTTTAAAGTGTTTTTTGTATGGGAATAAAGGAAGTAAAATCCTTTTAACTTCTCGTAATGAAAATGTTGATTCTGCAGTGTCAACTAATAATCAACTTCACAAATTAGATATATTGTCTCCCAATGATTGCTGGTTAATGTTTTTGAAACATTCATCTCTTTCTACTAATTCTAAAGAATATGCAACTTTAGAACCAATTGGTAGAAAAATTATTGAAAAGTGTAAGGGATTACCTTTGGCTGTGAAGACACTTGGAGGTTTATTGCGGAACAAGTGTGATGTAGGGGATTGGGAGAAAATACTTAAAAGTGAAATCTGGGAGCTGCCGGAAGATGAAAGTAAGATTGTTCCCGCACTAAGAGTAAGTTATCACTACCTCCCTTCACATTTAAAGCGGTGTTTTGTTTATTGCTCATTATTCCCTGAAGATTATCAATTTGACAAAGACGAATTAATCTTGTTATGGATGGCTGAAGATCTCTTACGACCAATGGGAAACAACACGTTAGAAAATATTGGTTCTGTATATTTTGATGAATTGGTTGCAAGGTCATTTTTTCAACCTTCCGATGCTTCTGCTGGGTTATTTGTAATGCATGATCTCCTGCATGATCTTGCAACGTTTTTTGCTGGAAAATTCTTTTTCGGAGAATTTGGCAATCCAGGTATGGTTGACAGCAAAACTCGTCATTTTTCATGTAATCAGTATCCAATGTCAAGATTTTCAGAGGCCTATGATGGAGCAATACATATGAGAACACTTTTATGTTTTGGTTATATGAAAATTGATCTTTGGCTAAAACAATTAAGGTGTTTAAGAGTTTTGGCTTTTGAAATGTGTGCAATCTTGTCGTTGCCTCATTCAATAGGTGAATTGATTTATTTGCGTTATTTGAATCTATCTAACACACCTATTATCAAGTTGCCTGAATCATTGTGTAAATTATACAATCTCCAAACGTTGAAATTGAGAAATCTTAGGCTTAAAATGTTTCCCAACAACATGCAAGATCTTGTGAACCTGCGCCACCTTGACATCAGAGGAACTCATCTGAAAGAGATGCCAAAGGGAATGAGCAAGTTAAAACATTTAAATTTCTTAGGAGACTATATTGTGGGAGAGCATGAAGAGAATGGGATAAGAGGATTGGGACCAATTGATGTTCATGGCTCATTTAGAATTTACAAATTAGAGAATGTGAACAACAGCAGCGAAGCTTTGGAGGCAAAGATGGGTAACAAGAAGCACATCAACGTTTTAGAATTCGAATGGAGTTCATTGTGTAGTTTATCTAGTGATGCTGCGAATGTTGAAACTGAAGAAGATATACTTAAAGAGTTGCGACCTCATGAAAACTTGAAGGAGTTTTCAATTGATGGGTATAGGGGTAAAATATTCCCTAATTGGTTAGGTCTTTCTTCTTACTCCAATATAACCAAATTGAAAATGTCTCGTTGTAAGAATTGTCGCGAGCTTCCTTCGCTTGGACAGTTACCCTCTCTACAGCATCTGGAGATTAATGAACTGCATGGGGTGAAGAGAATTGGTGAGGAGTTTTACAAGAGCGGTGAATCATGTCATGAGGGGACACCCTTCAGATCTCTTGAAATGCTGGAACTTTATCACATGAATGGTTTGCGAGTGTGGCATACTCCTGATAAATTGGATGTGTTTCCTAAACTTAAAACCCTTACAATGGATGACTGTCCAGTGTTAAGTGGAGATCTACCTGCTCGCCTTCGGGCTCTGGAGAAACTTGAAATTTGGCGTTGCAAAGTGCTTGCATGTTCGCTGCCGAGAGCTCCCAAGCTTCTCTCAATAGATGTAAACGGTTTCATGACTCCTATGCTTGTGGCGGAACCTTACGAAGTAAGAATTGGATTCTCTGAGCAAGTGCAGTCCGTATTGGAGTGCCTTCGCCACATCCAACCGCCCTGTATCCAACGTTTGACAATCTCGAGTTTTCGGTCAGCCATATCAATTTTGGGAGATTATTTGCCTGCTTCATTACAATATCTACAAATCTCGAATTGTTCGAAATTAACATTCCCAGAGACACTGGAACTCAAGTTGCTAACGGAGATAGATGTGCGCAACTGTGAATCAGTGAAGTTGTTGCCATTGGGGGCCCTTCCAAATCTCAAGGAACTCACAATCTCAAAATGCCCTTGTCTAGTATCCTTACCGGCGCTAGGCTTTGCTGCGCCCCACCTAGAACATCTGACTATAGGAGAATGCCCAGAAGTTGATTGTTTTGGAGAGGAGTGCCTCCCGCCCATCTTGACAACTCTTAAGATCCGTAAATGCCAGAAAGTAGAGAGGTGGATAACATCCAATGGTTTTCACACTGAAGGCCTTACCCATCTTAGCCTTAAAGAATGGAATGAAGTTAAGTGGTTCCCAAGAGAGGGTTGCCTTCCTGCTTCCCTTCAGTCTCTAAAATTGTCTGACTTTCCAAATCTGGAGACTCTAGACTGCAAGGGCCTTCACCATCTTACGTCCCTCAAAGAATTAACAATTAAATACTGTCCAAAGCTGGAGAATATCTCACAAGAAAACCTGCCTGCCTCCATATCAAAAGTCTACATCCTTGGAGAATGTCTTTTGGCAAGTAAGCTGGAAGAGATGAACGACCCACGGATTCAAATCGACATTGATGTTGACACAGAGCGGGAGGCAAGCTCATATTATGAGTCAGACCCAGATTATGAATCCTCTTGA 3432 0.3998 MIDQEVKKWLVDLQDALYMADDLLDELSTKAAISTPTSTPSDPGNYSSHCRSIVNSILEDSDHEMRVVDSMRDIVDKLESIVEEKDDLGLKQELVEDPEGMSWRVQSSLLESFDIYGREDDKEAIIGFLLDDTRDDKLSVISVEGIGGVGKTTLAQFVYNDAKVEGKFNLRAWVCVATTFDPVNVTKAIIEDITSSPCNLVNLNSLQTELKKKLTDKTFLIVLDDVWNNRQHLWDNFLKCFLYGNKGSKILLTSRNENVDSAVSTNNQLHKLDILSPNDCWLMFLKHSSLSTNSKEYATLEPIGRKIIEKCKGLPLAVKTLGGLLRNKCDVGDWEKILKSEIWELPEDESKIVPALRVSYHYLPSHLKRCFVYCSLFPEDYQFDKDELILLWMAEDLLRPMGNNTLENIGSVYFDELVARSFFQPSDASAGLFVMHDLLHDLATFFAGKFFFGEFGNPGMVDSKTRHFSCNQYPMSRFSEAYDGAIHMRTLLCFGYMKIDLWLKQLRCLRVLAFEMCAILSLPHSIGELIYLRYLNLSNTPIIKLPESLCKLYNLQTLKLRNLRLKMFPNNMQDLVNLRHLDIRGTHLKEMPKGMSKLKHLNFLGDYIVGEHEENGIRGLGPIDVHGSFRIYKLENVNNSSEALEAKMGNKKHINVLEFEWSSLCSLSSDAANVETEEDILKELRPHENLKEFSIDGYRGKIFPNWLGLSSYSNITKLKMSRCKNCRELPSLGQLPSLQHLEINELHGVKRIGEEFYKSGESCHEGTPFRSLEMLELYHMNGLRVWHTPDKLDVFPKLKTLTMDDCPVLSGDLPARLRALEKLEIWRCKVLACSLPRAPKLLSIDVNGFMTPMLVAEPYEVRIGFSEQVQSVLECLRHIQPPCIQRLTISSFRSAISILGDYLPASLQYLQISNCSKLTFPETLELKLLTEIDVRNCESVKLLPLGALPNLKELTISKCPCLVSLPALGFAAPHLEHLTIGECPEVDCFGEECLPPILTTLKIRKCQKVERWITSNGFHTEGLTHLSLKEWNEVKWFPREGCLPASLQSLKLSDFPNLETLDCKGLHHLTSLKELTIKYCPKLENISQENLPASISKVYILGECLLASKLEEMNDPRIQIDIDVDTEREASSYYESDPDYESS 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151064g00012 1143 FunFam Probable disease resistance protein At1g63360 360 445 - -
Stsc151064g00012 1143 SUPERFAMILY L domain-like 434 829 - -
Stsc151064g00012 1143 Gene3D - 103 271 IPR027417 -
Stsc151064g00012 1143 Gene3D - 359 444 IPR036388 -
Stsc151064g00012 1143 Pfam NB-ARC domain 118 340 IPR002182 GO:0043531
Stsc151064g00012 1143 SUPERFAMILY L domain-like 884 1100 - -
Stsc151064g00012 1143 Gene3D - 275 358 IPR042197 -
Stsc151064g00012 1143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 374 IPR027417 -
Stsc151064g00012 1143 Gene3D Ribonuclease Inhibitor 486 851 IPR032675 -
Stsc151064g00012 1143 PANTHER DISEASE RESISTANCE PROTEIN RP 32 833 IPR044974 GO:0006952
Stsc151064g00012 1143 Gene3D Ribonuclease Inhibitor 866 1115 IPR032675 -
Stsc151064g00012 1143 PRINTS Disease resistance protein signature 213 227 - -
Stsc151064g00012 1143 PRINTS Disease resistance protein signature 946 962 - -
Stsc151064g00012 1143 PRINTS Disease resistance protein signature 140 155 - -
Stsc151064g00012 1143 PRINTS Disease resistance protein signature 311 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151064g00012 Stsc-Chr151064 103089 106754 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151064g00012 519 604 WRKY Transcription Factor Family AT4G12020 38.636 1.58e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151064g00012 - - ahf:112708719 1230.31