Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151063g00026 ATGGCATTTAACAAGTGTTGGTTGATTTTGACAATAACATTGTGTGTTATTGGGATTGGTTATTCAGGTGATGATCATGATCATCATGATGATGATCATGGTCATCATGATGATCATGGTCATGATCAGTTATTAAGTCAAAACTTCTATCAAAAAACATGTCCTAGAGCCGTTGAAACCATTAGGAAGGCAGTGGATGATGTTGTTTCTCAAGAGCCTCGCATGGGTGCTTCCTTGCTTCGCCTCCATTTCCATGACTGTTTTGTCCAAGCAAATGACACCCCAACCTTCACAGGTGAGAAGAATTCATTTCCCAACAAGGATTCACTGAGGGGTTTTGAGGTCATTGACAGCATCAAATCCCAATTGGAAGACATGTGCCCTTCTGTTGTTTCTTGTGCTGACATCTTAGCTCTTGCTGCCAGAGATGCTGTTTTTGCTCTTAAAGGACCAAGATGGGAGGTTCAATTGGGCAGAAGAGACTCAACCACAGCAAGTTTAAGTGAATCTAATACAGACTTACCTGCACCCTCCTTCAATCTCAGTGGCCTTATCACTGCTTTCCAGAAGAAAAATTTCAACATCCAAGAAATGGTTACTTTATCAGGAGGTCACACAATAGGGAGAGTGAGGTGCACATTTTTCAGAGACAGGATTTACAATGAGAGCAACATAGATCCAAGCTTTGCAGAAGCAATGAGAGCATTGTGTCCCTCTGAAGATGGTAATGGAGATGACAACCTTGCTCCCTTTGATTCCATCACCCCAGACACTTTTGACAATGCTTTCTACCAGAATCTGGTGAATCAAAGGGGTATTGTGCACTCTGATCAGCAGCTATATGCTAATGGAGCAGGCATCACTGACTCTCAGGTCATCATGTATAGCAGAAACTTTGGTCGTTTCAAGAAGGATTTTGGAGATGCAATGGTTAAGATGAGCTTGCTTTCTCCTCTCACTGGCAATGATGGTCAAATCAGGACTAACTGCAGACTTGTTAATAATTAA 1008 0.4196 MAFNKCWLILTITLCVIGIGYSGDDHDHHDDDHGHHDDHGHDQLLSQNFYQKTCPRAVETIRKAVDDVVSQEPRMGASLLRLHFHDCFVQANDTPTFTGEKNSFPNKDSLRGFEVIDSIKSQLEDMCPSVVSCADILALAARDAVFALKGPRWEVQLGRRDSTTASLSESNTDLPAPSFNLSGLITAFQKKNFNIQEMVTLSGGHTIGRVRCTFFRDRIYNESNIDPSFAEAMRALCPSEDGNGDDNLAPFDSITPDTFDNAFYQNLVNQRGIVHSDQQLYANGAGITDSQVIMYSRNFGRFKKDFGDAMVKMSLLSPLTGNDGQIRTNCRLVNN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151063g00026 335 PRINTS Haem peroxidase superfamily signature 76 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151063g00026 335 PRINTS Haem peroxidase superfamily signature 197 212 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151063g00026 335 PRINTS Haem peroxidase superfamily signature 149 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151063g00026 335 PRINTS Haem peroxidase superfamily signature 131 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151063g00026 335 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151063g00026 335 ProSiteProfiles Plant heme peroxidase family profile. 44 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151063g00026 335 Pfam Peroxidase 62 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151063g00026 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 197 207 IPR019793 -
Stsc151063g00026 335 Gene3D Peroxidase, domain 2 175 313 - -
Stsc151063g00026 335 PRINTS Plant peroxidase signature 54 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151063g00026 335 PRINTS Plant peroxidase signature 149 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151063g00026 335 PRINTS Plant peroxidase signature 130 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151063g00026 335 PRINTS Plant peroxidase signature 196 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151063g00026 335 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151063g00026 335 PRINTS Plant peroxidase signature 111 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151063g00026 335 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151063g00026 335 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151063g00026 335 PRINTS Plant peroxidase signature 78 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151063g00026 335 CDD secretory_peroxidase 45 333 IPR033905 GO:0004601|GO:0042744
Stsc151063g00026 335 FunFam Peroxidase 175 313 - -
Stsc151063g00026 335 SUPERFAMILY Heme-dependent peroxidases 45 334 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc151063g00026 335 PANTHER PEROXIDASE 72-RELATED 43 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151063g00026 335 Gene3D - 48 331 - -
Stsc151063g00026 335 ProSitePatterns Peroxidases active site signature. 76 87 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151063g00026 Stsc-Chr151063 128409 130329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151063g00026 45 334 Peroxidase AT5G05340 52.862 9.80e-110 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151063g00026 K00430 - gmx:100802244 418.313