Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151063g00024 ATGTCATCTCGCGTTGTAGCGGAGAATGCATTACCGGTCACCAATACCACGCCGTATTTTGGGATGATGGAACTTGACGATTATACGCGGCGCTCAGCCGCAACCGGCGCCTCTCCTACGCTCGGACAGCTCCTCAAGCACGTCGGCGACGTGCGTAAGGAAGTTGTAGGAGACGGTAGCGAGACGCCGGTGCACCAAGCTCTCGAGATTGGTGACGGCACCGGAATGGAGCCACGCTCGCTGCCGTTTGTCCTCTCATTTAGCAATTTAACCTACAGCGTGAAAGTCCGTCGGAAACTGAGCTTCTCGGCGATACTTCCTCGAAGCCGGAGCCGTCTCGGCGCGGCGGCGGATTCGGAAGCACCGGCAGTGGGAGACAGCATGTTCTCACGGACCAAGACTCTGCTAAATGATATCTCCGGCGAGGCTCGAGACGGCGAGATCATGGCGGTTCTTGGCGCCAGTGGCTCTGGAAAATCCACCTTGATTGACGCCCTAGCAAACCGCATCGCTAAGGGAAGTCTGAAAGGAACGGTGGCACTGAACGGCGAGGCACTGGATTCTCGCCTCCTGAAGGTGATCTCTGCCTACGTGATGCAAGACGATCTCCTCTTTCCCATGCTCACCGTGGAAGAAACACTCATGTTCGCCGCCGAGTTTCGCTTGCCACGCACACTCTCCAAATCAAAGAAGAAAGCGCGTGTCCAAGCACTGATCGACCAGCTAGGTATCCGAAACGCGGCGAAAACGGTGATCGGCGACGAAGGCCACCGCGGAGTGTCCGGCGGAGAGCGTCGTCGAGTGTCGATCGGAATCGACATAATCCACGACCCTATCATACTCTTCCTTGACGAGCCAACCTCCGGACTGGACTCAACAAGCGCATTCATGGTGGTGAAGGTTCTACAGAGAATCGCACAGAGTGGAAGCATCGTGATCATGTCCATCCACCAGCCAAGTTACCGAATCTTAGGGCTTCTCGACAGAATGATCTTCCTCTCACGCGGCAACACCGTCTACAAGAACCGAACCGAGTTCGCATTGGACCTCATTCGGGATCTAGAAGGTTCCCCAGGCGGAACCAGAAGCCTGGTGGAGTTCAACAAGACCTGGCAGTCCATGAAGCACCCTGCACCCGCAGCACACAGTAACGCAGTCCACGACCAAAACGGCATGTCGTTGAAGGAAGCAATAAGCGCAAGCATTTCGCGCGGGAAGCTAGTGTCAGGCGCAACCAACACCAATTCAAATCCTTCTTCAATGGTTCCAACCTTCGCGAACCCGATCTGGATGGAGATGGTTACGCTATCGAAGCGTTCGTTCCTGAATTCTCGAAGAATGCCAGAGCTTTTCGGGATTCGGTTAGGTGCGGTTGTGGTCACAGGATTCATCCTAGCAACCATGTTTTGGAAACTCGATAACTCCCCGAAAGGAGTGCAAGAAAGGCTAGGCTTCTTCGCATTCGCCATGTCCACCACCTTCTACACCACCGCAGACGCGCTTCCAGTGTTCCTCCAAGAACGCTATATCTTCATGCGCGAAACAGCTTACAATGCTTACAGAAGATCCTCCTACCTTGTTTCCCATGCTCTCGTCTCGTTGCCATCGCTGGTGTTCCTCGCATTGACTTTCTCGGCTATCACGTTTTGGGCCGTGGGCCTTGACGGTGGCTTTTCGGGCTTTTTGTTTTACTTTTGGATAATATTGGCTTCTTTTTGGGCCGGGAACTCGTTTGTTACGTTTCTGTCCGGTGTGGTGCCTCATGTTATGCTGGGTTACACTATTGTGGTGGCAATTCTTGCTTACTTCTTGCTCTTCAGTGGCTTCTTCATTAACAGGGATAGGATTCCAAATTACTGGATTTGGTTCCATTACATGTCACTGGTGAAGTACCCCTATGAAGCTGTTCTACAGAACGAGTTTGAGGACCCCGTCAAGTGCTTCGTTAGAGGAGTGCAGATCTTTGATAACACGCCGTTAGCGGCGGTGCCGGAGGTGTTGAAGTTGAAGCTCTTGGATAGCATGAGCAACACCCTCGGGACGAAGATCACGAGTTCCACGTGCTTGACCACTGGTGCTGACATTTTGAAGCAGAATGGGGTGACGGATTTGAGCAAGTGGAACTGCTTGTGGGTCACTGTGGCTTGGGGTTTCTTCTTCAGGTTTCTATTCTACTTGTCGTTGAAGGTGGGAAGCAAGAACAAGAGGAGGTGA 2214 0.5294 MSSRVVAENALPVTNTTPYFGMMELDDYTRRSAATGASPTLGQLLKHVGDVRKEVVGDGSETPVHQALEIGDGTGMEPRSLPFVLSFSNLTYSVKVRRKLSFSAILPRSRSRLGAAADSEAPAVGDSMFSRTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKGSLKGTVALNGEALDSRLLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKARVQALIDQLGIRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGNTVYKNRTEFALDLIRDLEGSPGGTRSLVEFNKTWQSMKHPAPAAHSNAVHDQNGMSLKEAISASISRGKLVSGATNTNSNPSSMVPTFANPIWMEMVTLSKRSFLNSRRMPELFGIRLGAVVVTGFILATMFWKLDNSPKGVQERLGFFAFAMSTTFYTTADALPVFLQERYIFMRETAYNAYRRSSYLVSHALVSLPSLVFLALTFSAITFWAVGLDGGFSGFLFYFWIILASFWAGNSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPNYWIWFHYMSLVKYPYEAVLQNEFEDPVKCFVRGVQIFDNTPLAAVPEVLKLKLLDSMSNTLGTKITSSTCLTTGADILKQNGVTDLSKWNCLWVTVAWGFFFRFLFYLSLKVGSKNKRR 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151063g00024 737 FunFam ABC transporter G family member 6 125 349 - -
Stsc151063g00024 737 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 131 344 IPR027417 -
Stsc151063g00024 737 Pfam ABC-2 type transporter 434 641 IPR013525 GO:0016020|GO:0140359
Stsc151063g00024 737 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 119 360 IPR003439 GO:0005524
Stsc151063g00024 737 CDD ABCG_EPDR 84 340 - -
Stsc151063g00024 737 SMART AAA_5 145 337 IPR003593 GO:0016887
Stsc151063g00024 737 Gene3D - 127 352 IPR027417 -
Stsc151063g00024 737 ProSitePatterns ABC transporters family signature. 260 274 IPR017871 GO:0005524|GO:0016887
Stsc151063g00024 737 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 66 341 - -
Stsc151063g00024 737 Pfam ABC transporter 136 288 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151063g00024 Stsc-Chr151063 109047 111320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151063g00024 135 320 Calmodulin-binding Proteins AT2G36910 31.217 7.24e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151063g00024 K05681 - gmx:100803658 1216.83