Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151063g00020 ATGCCATTTCGAGTTCGCACTGCAATCTTCCGTTGGTCTCTGCAAAGTGTTCCTTACAGTACCCATTCTTCTTCTTCTTCCATTCTCCACAAGTTCTCTTCTTTGGCCCAACCGCAGGTTCATGGTCAATCTGTTGAAACATGTGACGATGATGGATTTTTGCCATGGTTGGAGCGGAAAGCTGGTTGTAGAATTTCTTCATCGCTTTCAATTGGGAAATCTTCATATGGCAGGTCTCTGTTTGCTTCGAAAGCGATAAAAACTGGAGATTGCATTTTGAAGGTTCCTTACAAAGTGCAAATAACTGCAGATAATCTCCCTGCTAAGATCAAATCTCTGATCAGTGAGGAAGTTGCGAATATTGCAAAACTTGCTGTTGTTCTTCTAATTGAGCGGAAATTGGGTCAGGACTCTCAGTGGAATCCTTATATTAGTTGTCTACCATGGCAAGGGGAGCCACATAACACGATATTTTGGAATGAAAGTGAGCTGGAGATGATTAGACAAAGCTCAGTTTATTGGGAAACAATTAACCAAATGTCTCAAACTGAAAGGGACTTCTTGGCAATCAGGCCTATTTTTGAATGTTTCGGTCAAAGTTTTGGAGATATTACTTATAAAGACTTCATGCATGCATGTACACTAGTTGGTTCTCGAGCATGGGGAAGCACAAATGGGTTATCTCTGATTCCTTTTGCAGATTTTGTAAACCATGACGGAAATTCAGAAGCCATTGTGATGAGTGACGATGACAAACAATTATCAGAGGTTACCTCTGATCGTGACTATGCTCCTGGGGAGCAGGTACTGATAAGATATGGAAAATTTTCAAATGCTACATTGATGTTAGACTTCGGTTTTACAGTCCCATACAACACTCATGACCAGGTTCAGATCCAGTTAGATATACCTAAGCATGATCCTCTGCACAAGATGAAGTTGGAACTCATGCAACAATACTTTGTGCCTCCAAACAAAGATGCTGAAAACTTGAAGCACTCTTGGAATCTCTTCACAATCAAGGAGGTCAGGTCGACTAAAGGGAAAGGTCTTCCGCAATCGCTTCGTGCTTTTGCCCGTGTTCTTTCTTGTACTAATCGTCAAGAACTTGATGATTTGGTTGTGGAAGCTGCACAAACTGACGGTAGGCTGGGAAGGCGCCCATTACCAGATGTCAACAAAGAGATTCAAGCACACCTGATGTTATCATCATTAATCACCCAGTTAATTGAGGAGCGCAGCGCAGCCATTATGTCGTTGGAGGAGTCTTTCAATTCTTCACCATTTTGTGAAAGAGTTTCTGTTAGAAGATTCATGGCCCGGGATCTTCTACGTGGCGAACTTCGGATTCTGAATTCTGCTTCTACATGGCTGGAGAACTACTGTAGAAGCTCATTCTAA 1401 0.4204 MPFRVRTAIFRWSLQSVPYSTHSSSSSILHKFSSLAQPQVHGQSVETCDDDGFLPWLERKAGCRISSSLSIGKSSYGRSLFASKAIKTGDCILKVPYKVQITADNLPAKIKSLISEEVANIAKLAVVLLIERKLGQDSQWNPYISCLPWQGEPHNTIFWNESELEMIRQSSVYWETINQMSQTERDFLAIRPIFECFGQSFGDITYKDFMHACTLVGSRAWGSTNGLSLIPFADFVNHDGNSEAIVMSDDDKQLSEVTSDRDYAPGEQVLIRYGKFSNATLMLDFGFTVPYNTHDQVQIQLDIPKHDPLHKMKLELMQQYFVPPNKDAENLKHSWNLFTIKEVRSTKGKGLPQSLRAFARVLSCTNRQELDDLVVEAAQTDGRLGRRPLPDVNKEIQAHLMLSSLITQLIEERSAAIMSLEESFNSSPFCERVSVRRFMARDLLRGELRILNSASTWLENYCRSSF 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151063g00020 466 Gene3D set domain protein methyltransferase, domain 1 50 288 - -
Stsc151063g00020 466 Gene3D - 290 463 IPR036464 -
Stsc151063g00020 466 SUPERFAMILY SET domain 51 292 IPR046341 -
Stsc151063g00020 466 Pfam SET domain 77 274 IPR001214 GO:0005515
Stsc151063g00020 466 Pfam Rubisco LSMT substrate-binding 305 451 IPR015353 -
Stsc151063g00020 466 ProSiteProfiles SET domain profile. 61 274 IPR001214 GO:0005515
Stsc151063g00020 466 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 52 409 - -
Stsc151063g00020 466 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 308 462 IPR036464 -
Stsc151063g00020 466 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 46 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151063g00020 Stsc-Chr151063 73128 78575 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151063g00020 52 267 NAC Transcription Factor Family AT3G56570 22.368 4.44e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Stsc151063g00020 SET 7.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151063g00020 K19199 - gmx:100818002 631.713