Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151063g00019 ATGGATTCTGAAAATTATGATTTAGATGAGTTTTTGGCTTCCATTTCCTCTGAATGTTCATATGATTTGAACCCCATCAACCCTTCTGTTTCCTTGTATGAATTAGATTTTCTACATGAATCTCAATTCTCATTATCAAATATGGATCATAATACCGATTTTGTTTTGAAGCCTAATTGTTCTACCAAATGCTTCACTAACCCAGAACCCTTTTTTGATCCATTGGAAGAACAACTGCTATCTGAATCAACATGGAACTCATTATGCATAATGAACAATTCAATGAAAAATCATTCTAATCATGTGAGTGCAATGGCAGAAGCTGATTTTCCATCAAGTTCTGAGGTATCCAAGAACTTATCAGAGGCAATTGATGTGGCAGAAGAGTTCTTGAACTTCACTTCAATAGATGATATTTGCCAATGGTTTGATCCTTTCCAAGAGGATAACTCAAACACCTTTCCTGAATCAATGCAATGTGATGATGCTACTTCCTTTTCTTGGAAATCAGTTATGAATGACTATGAGAATTGTCTCCTGGGAAGCATGGAACCTGAGTCAAACTTGATTGCACCAGTGGTGAGTTCTGCTGATGATACTTGCAGCTTTGAATGCCTATCAGAGTTTGATTTTGACGCGCTGACGGGCTTGTTCTCGGATTCACCAATTGAAGAGCTTTTGAAATGTGAAGAAGCAAATTGCAACAACCTTTTGAATAATAGTTCTAGTTCGTTTTTGGAGTTATCATCAGACAATAATGAAATGGAGATGATGAGGGACATTCCAAATCCATTGAACTTCACCAAAAATCTTGCTTGGTTTGAGGCAAGAAATAACTTGATGCAGCCCATTTCGGAGTTGAACACGACAAACAAGAAGAGAAAGAAAGTGCAGTTAGACTTGGTTATGGATGACAGCCATAGCATTAAGCGTGGAGAGACTCTTCTTGTGCACCCTCAGAAGAAAGAGGAGCCAAAAAAGCCTAGCAAGAAGAAGGATAAGGCAAGGGAGAGTAGTCGGCCGCGGCCAAAAGATCGCCAGCGGATTCAAGACTGCATTCAACAATTGAGAACAATCATTCCTGGCAAAGATGTTAAAGAGTGTAGCATTGATACATTATTAGAGTGCTCTATCAGATACATGAATTTCTTGTCAAGCACTTCACATTATGCAAATAAGCTAGAAGAACCAGATAAGCCTAAGCTTATTGAGCAGGCAAATGGAGTGGTTCTACAAGAGCGCAGTGTGGAAGAAACATGGTCATTTGAAGAACCACATCAAACATTGTTATGCCCAATTATAGTTGAGGATATGGATCATCCTGGCCAAATGCTGATTGAGATGCTTTCTGAGGAGCAAGAGTTTTCTCTTGAGTTGGCTGACACAATCAAGGGTCTTGGTTTGAATATTCTGAAAGCAAAGATGGAAACAAGGAACACAAAGCTATGGGCACGCTTTATTGTGGAGGCTAATAGACATGTGACAAAGATTGATGTGTTTTGGTCCCTTCTCCATCTTGTAGAGAAGAAAAACACTTCTGGGTTATTGGATTCATCAGCTAATAACAAGCATTGCAATAATGTAATGAATGATGGAAGTGTTTCAGGATTGGACAACATTAAGAAGAGAGGGAGAGTTGAAACTTTTTTATGTCCATGA 1659 0.3876 MDSENYDLDEFLASISSECSYDLNPINPSVSLYELDFLHESQFSLSNMDHNTDFVLKPNCSTKCFTNPEPFFDPLEEQLLSESTWNSLCIMNNSMKNHSNHVSAMAEADFPSSSEVSKNLSEAIDVAEEFLNFTSIDDICQWFDPFQEDNSNTFPESMQCDDATSFSWKSVMNDYENCLLGSMEPESNLIAPVVSSADDTCSFECLSEFDFDALTGLFSDSPIEELLKCEEANCNNLLNNSSSSFLELSSDNNEMEMMRDIPNPLNFTKNLAWFEARNNLMQPISELNTTNKKRKKVQLDLVMDDSHSIKRGETLLVHPQKKEEPKKPSKKKDKARESSRPRPKDRQRIQDCIQQLRTIIPGKDVKECSIDTLLECSIRYMNFLSSTSHYANKLEEPDKPKLIEQANGVVLQERSVEETWSFEEPHQTLLCPIIVEDMDHPGQMLIEMLSEEQEFSLELADTIKGLGLNILKAKMETRNTKLWARFIVEANRHVTKIDVFWSLLHLVEKKNTSGLLDSSANNKHCNNVMNDGSVSGLDNIKKRGRVETFLCP 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151063g00019 552 MobiDBLite consensus disorder prediction 310 349 - -
Stsc151063g00019 552 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 333 384 IPR011598 GO:0046983
Stsc151063g00019 552 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 42 526 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151063g00019 Stsc-Chr151063 69815 72039 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151063g00019 298 514 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 41.364 6.86e-46 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151063g00019 - - adu:110281254 708.753