Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151062g00030 ATGTTTTCCATAGCAATATTTTTGGTTTCTTTAACTTGTCTGTGGCTATGGAGATGCAGCAACAAGGCTAAGAGATTACCTCCTGGTCCAACAGGGTTGCCAATCTTGGGGAGCCTTCACAAGTTGGTAGCTAATCCTCATCGTGATCTGCACAAACTAGCACAAAAACATGGACCCATCATGTACCTGCGCCTAGGTTTTGTGCCCACCATTGTTGTTTCTTCATTCCAAGCTGCTGAATTGTTCCTCAAGACACATGACCATGTCTTTGCTAGCAGACCACCTCTAGAAGCTGCAAAGTACATTTCTTGGGAGCAAAGAAATTTGAGTTTTGCTGAATATGGCCCTTACTGGCGCAACATGCGCAAGATGTGCACATTGGAATTACTGAGCCAAACCAAAATCAGCTCCTTCAAAACCATGAGGCAGGAAGAGATTGACCTATTCATCAAGCTTGTGAGAGAAGCCGCCAGTGATGGAGTTGTTGTCGATCTTAGTGCTAAGGTTGCAGCATTAAGTGCAGACATGAGTTGCAGAATGATTCTGGGGAAGAAGTACATGGACCAAGACTTGGATGAGAAAGGATTCAAAGCTGTTATGCAAGAGATACTGCAATTGGCAGCAATTCCAAACGTAGCTGACTATATTCCTTACATCGGTGCACTCGATCTTCAAGGGTTAATAAAGCGCATGAAGGTAGTGCGAAAAATCTTTGATGAGTTCTTTGACAAAATTATACATGAGCACCTGCTATCAGAGAACAAAGAGGACAAAGCTAAGGACTTTGTGGATGTCATGTTGAGCTTTCTTGGCACCGAAGAATCTGAATATCGTATTGAACGGTCTAATATAAAAGCGATATTGCTGGATATGCTGGTTGGTTCAATAGACACTTCATCTACAGCAATAGAGTGGGCAATTTCAGAGCTGATAAAGCATCCAAGGGTGATGAAGAAGCTTCAAATGGAGTTGGAATCTGTCGTAGGTGTGAATAGGATTGTGGAGGAGTCAGACTTGGAAAAGTTGAAGTATTTAGACATGGTCATCAAGGAAAGCATGAGGATTCATCCAGTGGGACCATTACTAATACCACATCAATCTGTGGAAGATTGCATGGTTGGAGATTTCTTCATACCTAAAAACTCCAGGGTGATAGTAAATGCATGGACAATTATGAGAGACCCAAGTGCTTGGACTGAGCCAGAGGAATTCTGGCCAGAGAGATTCGAGGGAAGAGACATCAACATTAGAGGGAAGGACTTCCGATTGATACCATTTGGGTCTGGCAGAAGAGCATGTCCTGGACTGCAGTTAGGCCTGACCGTGGTTCGGTTAGTGGTGGCGCAGCTTGTGCATTGCTTTGATTGGAAGTTACCGAATAACTTGTTGCCAAATGAATTAGACATGAGTGAGGACTTTGGCCTCTCAATGCCCAGGGCCAATCATCTAGTTGCCATCCCTTCTTATCGGCTTCACGATGAAAGGGTTAGAGAACGAGGAATAAACAAAACAGTAGGCATAGACATAGACATAGAGAGTAGAGAGACAGTTGGGTCTGGTAGAAGAGGATGCCCTGGATTGCAGTTAGCACTAACTGTGGTTCATTTAGTGGTGGCGCAGCTTGTGCATTGCTCTGATTGGAAGTTAACAAACAACTTGTTGCCAAGTGAATTGGACATGACTGAGGAGTTTGGCCTCACAATGCGTAGGGCTAATCATCTGTTAGCCATTCTTACTTATCAGATTCCCAGTGAAGGGGTTTCAGCAAATATGTAA 1776 0.4375 MFSIAIFLVSLTCLWLWRCSNKAKRLPPGPTGLPILGSLHKLVANPHRDLHKLAQKHGPIMYLRLGFVPTIVVSSFQAAELFLKTHDHVFASRPPLEAAKYISWEQRNLSFAEYGPYWRNMRKMCTLELLSQTKISSFKTMRQEEIDLFIKLVREAASDGVVVDLSAKVAALSADMSCRMILGKKYMDQDLDEKGFKAVMQEILQLAAIPNVADYIPYIGALDLQGLIKRMKVVRKIFDEFFDKIIHEHLLSENKEDKAKDFVDVMLSFLGTEESEYRIERSNIKAILLDMLVGSIDTSSTAIEWAISELIKHPRVMKKLQMELESVVGVNRIVEESDLEKLKYLDMVIKESMRIHPVGPLLIPHQSVEDCMVGDFFIPKNSRVIVNAWTIMRDPSAWTEPEEFWPERFEGRDINIRGKDFRLIPFGSGRRACPGLQLGLTVVRLVVAQLVHCFDWKLPNNLLPNELDMSEDFGLSMPRANHLVAIPSYRLHDERVRERGINKTVGIDIDIESRETVGSGRRGCPGLQLALTVVHLVVAQLVHCSDWKLTNNLLPSELDMTEEFGLTMRRANHLLAILTYQIPSEGVSANM 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151062g00030 591 FunFam Cytochrome P450 83B1 14 486 - -
Stsc151062g00030 591 PANTHER CYTOCHROME P450 93A3-LIKE 516 582 - -
Stsc151062g00030 591 CDD CYP71-like 56 483 - -
Stsc151062g00030 591 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Stsc151062g00030 591 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151062g00030 591 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151062g00030 591 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151062g00030 591 SUPERFAMILY Cytochrome P450 518 578 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151062g00030 591 PRINTS E-class P450 group I signature 78 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151062g00030 591 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151062g00030 591 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151062g00030 591 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151062g00030 591 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151062g00030 591 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151062g00030 591 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151062g00030 591 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151062g00030 591 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151062g00030 591 Pfam Cytochrome P450 27 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151062g00030 591 Gene3D Cytochrome P450 516 581 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151062g00030 591 Gene3D Cytochrome P450 17 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151062g00030 591 SUPERFAMILY Cytochrome P450 27 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151062g00030 Stsc-Chr151062 195163 197344 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151062g00030 506 571 Cytochrome P450 AT5G07990 39.706 2.04e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151062g00030 K20562 - gmx:100809526 800.045