Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151060g00038 ATGGAACACAAAGTAACAAGAACTAGTGAAGCTCAACCCATAAGATGCAAAGCTGCGGTTAGTCGCAAACAGGGTGAGCCATTGAGCATTGAAGAGATCATTGTGGCTCCACCAATGCCTCATGAAGCAAGGATTAAAGTTATTTGCACTACCCTTTGTCATGTTGATCTCACTTTTTGGAGGATTAAGGACCCTGCTTCAATTTGGCCAAGAATTTTGGGTCATGAGGCAATTGGGGTTGTGGAAAGCATAGGAGAGAATGTAACTGAAGTTGCAAAAGGAGATGTAGTCATGACAATTTTCTTACCAGATTGTGGGGAGTGTGTGGATTGCAAATCAGAAAAGAGCAACCTTTGTTCTAAATTCCCATTCAAAGTATCTCCATGGGTGACTAGATATGATAGTAGCAGATTCACTGATCTCAATGGACAAATCATACACCATTTTCTTTTTGTTTCAAGCTTTAGTGAGTACACTGTTGTTGACATTGCCAATCTAACCAAGATTGATCCGGTCGCGCCTCCGAACAAGGCATGCCTCCTTAGTTGTGGTATCTCTGCAGGGCTAGGTGCTGCTTGGAGATTAGCAAATGTAGAGCCAGGTTCAACTGTGGCTATTTTTGGGTTAGGAAGCATTGGATTAGCAGTTGCTGAAGGAGCAAGATTTTGTGGAGCAACTAGGATTATAGGTGTGGATGTTAAGCCAGAGAAATTTGAAACTGCAAAAAAGTTTGGAGTTACTGATTTTGTTCATGCCGGAGAATGTGGAGACAAATCTCTGAGCCAGGGTTGGGGAAAAACAATTGTTTTAGGAGTGGACAAACCAGAATCCAATTTGAGCCTTAACACTAGAGAGGTTCTCTTCAATGGGAAGAGCCTAATTGGATGCTTGTTTGGAGGGCTCAAACCCAAATCTCATGTCCCTATTCTCCTAAAACGTTACATGGACAAGGAACTAAAGTTGGATGAATTTGTCACTCATGAGTTGAAATTTGAAGACATCAACAAAGCTTTTGATTTGCTGGTAAATGGAGAGTGTGTTAGATGTGTGGTTTGGATGGACAAATGA 1068 0.4157 MEHKVTRTSEAQPIRCKAAVSRKQGEPLSIEEIIVAPPMPHEARIKVICTTLCHVDLTFWRIKDPASIWPRILGHEAIGVVESIGENVTEVAKGDVVMTIFLPDCGECVDCKSEKSNLCSKFPFKVSPWVTRYDSSRFTDLNGQIIHHFLFVSSFSEYTVVDIANLTKIDPVAPPNKACLLSCGISAGLGAAWRLANVEPGSTVAIFGLGSIGLAVAEGARFCGATRIIGVDVKPEKFETAKKFGVTDFVHAGECGDKSLSQGWGKTIVLGVDKPESNLSLNTREVLFNGKSLIGCLFGGLKPKSHVPILLKRYMDKELKLDEFVTHELKFEDINKAFDLLVNGECVRCVVWMDK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151060g00038 355 Pfam Alcohol dehydrogenase GroES-like domain 40 168 IPR013154 -
Stsc151060g00038 355 SUPERFAMILY GroES-like 10 194 IPR011032 -
Stsc151060g00038 355 FunFam Alcohol dehydrogenase 6 19 199 - -
Stsc151060g00038 355 Gene3D - 297 349 - -
Stsc151060g00038 355 FunFam S-(hydroxymethyl)glutathione dehydrogenase 188 262 - -
Stsc151060g00038 355 Gene3D - 259 296 - -
Stsc151060g00038 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 174 316 IPR036291 -
Stsc151060g00038 355 Gene3D - 188 255 - -
Stsc151060g00038 355 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Stsc151060g00038 355 SUPERFAMILY GroES-like 304 352 IPR011032 -
Stsc151060g00038 355 Gene3D - 19 187 - -
Stsc151060g00038 355 PANTHER ALCOHOL DEHYDROGENASE 259 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151060g00038 Stsc-Chr151060 185958 188578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151060g00038 42 186 Monolignol Biosynthesis Gene Families AT4G37970 30.872 6.06e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151060g00038 K00121 - gmx:100806887 572.778