Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151060g00012 ATGGTTGATAATGATATCAAATACTCTCTTCTCTCCCAAATCCCTCAAACTTCTAAACATGAATCCTTAGATCACCATCGCCCTGGTAGTTTTGCTACCCCACCTAGTGATTCTGTAAACTCGGCCACCAAAAATGATGCAAACCAAACTGGAAACAAAAGAAAAACAATCTCTGATATTGAGAGGTACATCCTCGTACCCCCTGTAAACACTAACAACGATGGCATTCCTTTCCTAGGATTTAAAAAACCTCGTGGTAGGCCACGTGGCTCAAAGAACAAGCCGAAGCTACCCATTTTCCTAAGGAAGGTAAATGAAAATGGCATGCGTCCGATCCTTATTCAGATGGCCCCAGGAGTTGATGTGATTGGGGCTTTAATCAACTTTGCCGTGCGCCGCCACATCAGAATATCGATTCTCAGTGCTTGTGGATCGATATCCGAGGCAGCGATTCACAACACACTACCTTTAAATACTAACGCAATTGGCTTATCCATGAGAGGACCGTTTAATATGATGTCCCTCTCAGGAACCTATTATGATGGCCATGTGCGGCCTGCATGTTCTTCTTTTTCAATTCTTCTTGGTGGAACACATGGCCAAGTTTTTGGTGGGATCGTTGCTGGGAAGGTTGTGACAGCAGGAACTGTTAACGTTATGGTTGCATCGTTCGAGAGGACTGAGTTTTATGCGCTGCAACTCAATGCAAATGGAGGGTACGACGACGTTAATAGCAAAGAGAATAATAACACCGTTAGGATATCTACATATAAAGCTGGTAATCCTATTACTCGACAAACTGCGGTTACTAAGCTTGTTCCTCTTCATATTGGCAACTATAGTGGTGGCGGTGGCAACATTGCTAGTGCTGCTACTACTAATTTGAAGAATGAGATAGTGGTTATTGATGATAACTATCAGATTTAA 927 0.4283 MVDNDIKYSLLSQIPQTSKHESLDHHRPGSFATPPSDSVNSATKNDANQTGNKRKTISDIERYILVPPVNTNNDGIPFLGFKKPRGRPRGSKNKPKLPIFLRKVNENGMRPILIQMAPGVDVIGALINFAVRRHIRISILSACGSISEAAIHNTLPLNTNAIGLSMRGPFNMMSLSGTYYDGHVRPACSSFSILLGGTHGQVFGGIVAGKVVTAGTVNVMVASFERTEFYALQLNANGGYDDVNSKENNNTVRISTYKAGNPITRQTAVTKLVPLHIGNYSGGGGNIASAATTNLKNEIVVIDDNYQI 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151060g00012 308 ProSiteProfiles PPC domain profile profile. 106 246 IPR005175 -
Stsc151060g00012 308 MobiDBLite consensus disorder prediction 16 54 - -
Stsc151060g00012 308 MobiDBLite consensus disorder prediction 33 54 - -
Stsc151060g00012 308 Gene3D - 109 248 - -
Stsc151060g00012 308 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 51 245 IPR014476 GO:0003680
Stsc151060g00012 308 Pfam Plants and Prokaryotes Conserved (PCC) domain 110 225 IPR005175 -
Stsc151060g00012 308 CDD DUF296 110 224 IPR005175 -
Stsc151060g00012 308 SUPERFAMILY AF0104/ALDC/Ptd012-like 107 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151060g00012 Stsc-Chr151060 61330 62256 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151060g00012 82 232 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 34.615 6.37e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151060g00012 - - adu:107496595 317.775