Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151060g00004 ATGTCAATTCTTATTCTCTGTGATGAGTATCCAACTTCCCGGTGGTGCCTTGATGAACTTGTCAAGATCATGGAGTGTTCCGACAACGGAAGAAAGCGGCCAGTGTTACCAATCTATTTCCTTGTGGCAAAATCAGATGTGCAGTTTCAGAAAAATAAGTATGACACAGCCATGGCTGCTCATGAAGATAAAGGAAGATACAATCACAAGTTGGAAGCATGGAGGTCAGCTTTGTCTGAAGTAGGCAAGATTTATGGTCTACTCTGTGATCAGAAAACACCATGGGGGGAGGCTATTGATAACATTGTTGAAGAGGTCACAAAAAGACTTCCTCCCTTGCCTCTGTACATTGACCGTCCACTTGGACTTGATTCTGAACTTGAAGAGGCGAAATCACTTCTAGAGATTGGTTCTCGTGCTACCAGTTTCATGCTGGGAATTCATGGAGACGATGATGATATAAGCAAATTTGTTACGGAGCTGTATAACAAGATTAGGCCTCACTTTGTAACTGCGAGTTTTCTTTCTAATATCAGAGAGAAAACAAGTGAAAGTGGTGGTGGCTTAGAAGATCTACAAGAGAGGCTTCTTTCTGAGATGGGAGAGGAGGTGAAGACTAAGATTGGAAGCACATTCAAAGGATCCTCTGAAATAAAACGAAGACTAGGCCAAAAAAGAGTTCTTCTGGTTTTGGACGATGTTGATAGTATACAACAACTGAGTTCACTAGCAGGAGGACTTGATTGGTTTGGTCCAGGCAGTAGGGTCATTATAACAACAAGATATGAACATGTGCTAGATGATCATGTGTCATATAATGGTGTTGAAGTTAAGAAATATTGCATCACTGAAGGAAGTAATTCATCTGTGAAGGAGGAAAATGTAGTGGGATTGGAGAAAGATTTTGAAATTGTGATTAATCAACTCAAAGAGGAAGATTCTCCTGAGAATGTTGTTTCCATTGTTGGCATGGGTGGGCTAGGAAAGACTACCCTTGCTCGAAAGATCTATAAGAGCGATGAGGTGAAGAAGCTATTCCCCTGCCGTGCATGGGCAACTGTTTCCAAGGAGTACAATGCAAAGGAAGTTTTCAAAAGCCTTCTCAAGTGTCTGAAGCCGTCCACATCTCAATATGAAGATTCAAGTAGTGAAGAGGAGCTGAAGCAGAAGGTGAGTAGATGTCTGCAAGGGAAAAAGTACTTGGTAGTCCTTGATGATGTTTGGGATGCTAAAACATGGAGCAATATAAAGAATTGTTTCCCAGAAAAAAACAATGGTGGCATGATCCTAATAACTACTCGTAATGATCGGGTGGCCAATGTTTCAGAGTCAAAGGAACCTCATCACAACATTTCTTTTATGGATAAAGAGGAAAGTTGGGAACTGTTTCGCAATGAGGTTTTCAGCAGGAAAAACTGTCCTCCCGAGCTAGAACCTATTGGTAGATCAATTGTTGAAACTTGCAATGGTTTGCCATTGGCTATCAAAACCACAGCTGGCCTTGTTGCGAAGAGGGAGAGATTAGAGGATGCTTGGGAAGAAATTATGAATTTACTCCCTTATTGGAGTGTTGCTGAGGAGGATAGTAGTGAGGTGATGATGGAGATTTTGAAGTTTAGCTATGATGATTTGCCCAACAAAATGAAGCCATGCTTTCTATATCTTGGGGTGTTTCCTGAAGATGAAGAGATTCGGGTGAGAGACTTGATCCGCCTATGGATGGCAGAAGGCTTCATAGAACCAATCCAAATCGGAAGATCAAAAGCAACTCCACAACCTGAAGATATTGGTGAGCAATACTTGAAGGAGCTAGTGGATCGCAACTTGGTACAAGTGGTGAAGAGGAGGAGTGATGGCAAAGGTGTGAAAACATGTAAGATTCATGATCTCTTCCGGGACTTGTGCATATCTGAGAGCAACAAACCTGGCAACAATACTCATAAATTATCCTTGCTCAGCAACATAGGATCATATGCATGTTTAGAAACATCTAATCAACCATGCACTTATTCCTTGTTCGTATATGGAGATGAGGAGGAGTGGTCACATCATATTCCAGAAGCTTGCCAAGTTAATGTGCTATATGTTACACCTTACATCGACTATCAAGATGAGTATTTGAAGTGGTTGAAAAACTCCAAGTTCTTGACACTGGGCTTTTATGTATCGTCGCATGAGTTATGTAAGCTTCAGAGTTTACAAACATTTCATAGGGCCACCATTGATAACCTAAGTATTGGGGGGTTAAAACAACTAAGACATCTTAATGGTGTATTGAATATATTAGCAGATGAACAAGTAATAAAAGATAAAATGAAGAGTCTCCAAACCCTATCTTATGTGTATGCCGATTCACAACTCGGGAGCTTACTCGACAATGGCTGCTTTCCCAACTTGAGAACACTTGGTCTATTTACAAGTTATGAGGACCAAGGTTCTGCAGAAGAAAACTTGAAGAGCCTGCACCGCCTAAGAAATCTAGGTAAGCTGAAACTTCGTTGTGGAAAAGACGGTAGGATTCCATTACACAGAATTGCATTTCCGCCAAATCTTACCAAGATTACCTTGGATAACTTTTGGGGTTTGAATTCTAAAGATATGAATAACCTGGGACGAATTCCTAGCCTTAAGATTTTAAAGCTGAAATATGGAGATTGTGAGGAAGAAACTCTTTTTTGTGGTACTGCTGGGAGCTTTCCGCAGCTTCAAGTGTTTATCATGATAATGGTGATGAGGATCACGCGTCTTACATCAGAAGAAGGTGCGATGCCTCGTCTTCGACGTGCAGTCTTCGATGACTGCCCTTACTTGAAGGAGCTCCGCAGGGATCCCCCTGACCTGTTGTATGCTGCTGCTCTTGAAACCAATGCTTCACCACTGGGCCACTGCCCGCAGCAGCCCGCGGGGTTAAATCTAGTTATATAG 2925 0.4174 MSILILCDEYPTSRWCLDELVKIMECSDNGRKRPVLPIYFLVAKSDVQFQKNKYDTAMAAHEDKGRYNHKLEAWRSALSEVGKIYGLLCDQKTPWGEAIDNIVEEVTKRLPPLPLYIDRPLGLDSELEEAKSLLEIGSRATSFMLGIHGDDDDISKFVTELYNKIRPHFVTASFLSNIREKTSESGGGLEDLQERLLSEMGEEVKTKIGSTFKGSSEIKRRLGQKRVLLVLDDVDSIQQLSSLAGGLDWFGPGSRVIITTRYEHVLDDHVSYNGVEVKKYCITEGSNSSVKEENVVGLEKDFEIVINQLKEEDSPENVVSIVGMGGLGKTTLARKIYKSDEVKKLFPCRAWATVSKEYNAKEVFKSLLKCLKPSTSQYEDSSSEEELKQKVSRCLQGKKYLVVLDDVWDAKTWSNIKNCFPEKNNGGMILITTRNDRVANVSESKEPHHNISFMDKEESWELFRNEVFSRKNCPPELEPIGRSIVETCNGLPLAIKTTAGLVAKRERLEDAWEEIMNLLPYWSVAEEDSSEVMMEILKFSYDDLPNKMKPCFLYLGVFPEDEEIRVRDLIRLWMAEGFIEPIQIGRSKATPQPEDIGEQYLKELVDRNLVQVVKRRSDGKGVKTCKIHDLFRDLCISESNKPGNNTHKLSLLSNIGSYACLETSNQPCTYSLFVYGDEEEWSHHIPEACQVNVLYVTPYIDYQDEYLKWLKNSKFLTLGFYVSSHELCKLQSLQTFHRATIDNLSIGGLKQLRHLNGVLNILADEQVIKDKMKSLQTLSYVYADSQLGSLLDNGCFPNLRTLGLFTSYEDQGSAEENLKSLHRLRNLGKLKLRCGKDGRIPLHRIAFPPNLTKITLDNFWGLNSKDMNNLGRIPSLKILKLKYGDCEEETLFCGTAGSFPQLQVFIMIMVMRITRLTSEEGAMPRLRRAVFDDCPYLKELRRDPPDLLYAAALETNASPLGHCPQQPAGLNLVI 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151060g00004 974 Gene3D - 282 449 IPR027417 -
Stsc151060g00004 974 FunFam Probable disease resistance protein At1g61300 277 447 - -
Stsc151060g00004 974 SUPERFAMILY L domain-like 622 948 - -
Stsc151060g00004 974 Pfam TIR domain 2 109 IPR000157 GO:0007165
Stsc151060g00004 974 Gene3D - 454 545 IPR042197 -
Stsc151060g00004 974 Gene3D Ribonuclease Inhibitor 705 956 IPR032675 -
Stsc151060g00004 974 Gene3D - 546 637 IPR036388 -
Stsc151060g00004 974 Gene3D - 110 273 IPR027417 -
Stsc151060g00004 974 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 289 555 IPR027417 -
Stsc151060g00004 974 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 275 IPR027417 -
Stsc151060g00004 974 Gene3D - 1 109 IPR035897 -
Stsc151060g00004 974 PANTHER DISEASE RESISTANCE PROTEIN RP 295 907 IPR044974 GO:0006952
Stsc151060g00004 974 PRINTS Disease resistance protein signature 318 333 - -
Stsc151060g00004 974 PRINTS Disease resistance protein signature 488 502 - -
Stsc151060g00004 974 PRINTS Disease resistance protein signature 394 408 - -
Stsc151060g00004 974 ProSiteProfiles TIR domain profile. 1 110 IPR000157 GO:0007165
Stsc151060g00004 974 Pfam NB-ARC domain 190 271 IPR002182 GO:0043531
Stsc151060g00004 974 Pfam NB-ARC domain 299 543 IPR002182 GO:0043531
Stsc151060g00004 974 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 86 IPR035897 -
Stsc151060g00004 974 FunFam Probable disease resistance protein At1g63360 541 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151060g00004 Stsc-Chr151060 16714 26668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151060g00004 12 270 WRKY Transcription Factor Family AT4G12020 28.571 1.45e-15 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151060g00004 - - adu:107486433 1358.97