Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151060g00001 ATGGAACAGTTAAAGCAGGACATTGCAAATGCTAACAAGCAGAAACAATTGATTTCTAAGGCACTTTCAAAAAAGGAAAAGTCACTCGTTGACGTCCAGAATCAGATTGAACAACTTAAAGCTAGTATGGCAATGAAAACAGCTGAGATGGGCACAGAGCTAATTGATCATTTAACACCGGAGGAAAAGAAGCTTTTGTCTGATTTGAATCCTGAAATCAAGGAACTTAAAGAGAAGCTTGTTGCGTGCAAGACTGATCGTATTGAGACTGAAGCACGGAAAGCAGAGCTGGAAACTAATCTAACAACAAATCTGAGGAGAAGGAAGCAAGAGTTGGAAGCTGTAATATCATCTGCGGATGATGACACTCTGGGTGTAGATGCTGGATTGAAGGGGCAAGAACTTAGCGATGCTAAGTTGTTAGTTGATGATGCAACAGAGCAACTTAGAAGAGTCTCTGATAGTATAACTGAACGATCAAAGCAAATTAAAAGGATCAAGGAAGAAATCAGTAAGTTGAAGTCTTTGGAGGATGAGTATGAAAGAGAACTCCAGGAAGAAGCAAAAGAATTAGAGCAGTTGCTGAGTAAAAAAAATATATATTCTGCTAAAGAAGAAGAATATACGAAGAAAATAAGGGAATTGGGCCCATTGACATCAGATGCATTTGAGACGTACAAAAGGAGGAACATCAAAGATTTGCATAAAATGTTGCACAGGTGCAATGATCAATTGCAGCAGTTCAGTCATGTAAACAAGAAAGCGCTTGACCAGTATATAAATTTTACAGAACAAAGAGAGGAACTTCAGAAAAGGCAAGCTGAACTTGATGCAGGAGATGAGAAAATTAGAGAGCTAATATCTGTACTAGATCAACGAAAGGATGAATCAATAGAGCGCACTTTCAAAGGTGTTGCTAGGCATTTCCGAGAAGTGTTTTCTGAACTTGTACAGGGTGGTCATGGTCATCTGGTTATGATGAAGAAGAAGGATGGTGGTGGTCATGATGATGATGATGATGACGAGGATGGTCCTCGTGAAGCGAATCCTGAGGGTAGAGTAGAAAAGTACATTGGAGTGAAAGTGAAGGTCTCTTTTACAGGACAAGGAGAGACACAGTCCATGAAGCAGTTGTCTGGGGGTCAAAAAACTGTAGTTGCCCTTACACTTATTTTTGCCATACAACGATGTGACCCTGCTCCCTTTTATCTATTCGATGAGATTGATGCGGCTCTGGATCCACAATACAGAACTGCTGTTGGAAATATGATCCGTCGTCTGGCAGACTTTTCAACCACTCAGTTTATCACAACAACATTCCGTCCGGAACTTGTGAAAGTTGCTGATAAGATCTATGGAGTGACACATAAAAGCAGGGTCAGCCGTGTTAATGTTGTGTCTAAGGACGATGCTCTAGAATTTATTGAGCATGATCAGATGCAAAATGCTGAATAA 1455 0.4027 MEQLKQDIANANKQKQLISKALSKKEKSLVDVQNQIEQLKASMAMKTAEMGTELIDHLTPEEKKLLSDLNPEIKELKEKLVACKTDRIETEARKAELETNLTTNLRRRKQELEAVISSADDDTLGVDAGLKGQELSDAKLLVDDATEQLRRVSDSITERSKQIKRIKEEISKLKSLEDEYERELQEEAKELEQLLSKKNIYSAKEEEYTKKIRELGPLTSDAFETYKRRNIKDLHKMLHRCNDQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAGDEKIRELISVLDQRKDESIERTFKGVARHFREVFSELVQGGHGHLVMMKKKDGGGHDDDDDDEDGPREANPEGRVEKYIGVKVKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAVGNMIRRLADFSTTQFITTTFRPELVKVADKIYGVTHKSRVSRVNVVSKDDALEFIEHDQMQNAE 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151060g00001 484 Coils Coil 73 93 - -
Stsc151060g00001 484 Coils Coil 252 272 - -
Stsc151060g00001 484 FunFam Structural maintenance of chromosomes 3 264 476 - -
Stsc151060g00001 484 MobiDBLite consensus disorder prediction 325 351 - -
Stsc151060g00001 484 Coils Coil 156 204 - -
Stsc151060g00001 484 Gene3D - 264 476 IPR027417 -
Stsc151060g00001 484 Coils Coil 1 49 - -
Stsc151060g00001 484 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 472 IPR027417 -
Stsc151060g00001 484 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 2 477 - -
Stsc151060g00001 484 Pfam RecF/RecN/SMC N terminal domain 166 458 IPR003395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151060g00001 Stsc-Chr151060 1 5490 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151060g00001 359 444 Structural Maintenance of Chromosomes family AT5G15920 29.670 6.50e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151060g00001 K06669 - lja:Lj2g3v2905090.1 800.816