Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151059g00048 ATGGATTTTTTCATGCAATCCTTATTGCTAATTATGATCACCTTATTAGTTATATCCATCTTTGTTCTGAATCAAAAAAATCAGAGTGGCACCAAAACCCTGCCACCAGGTACTTTTGGATGGCCTATAGTGAATGAAACCTACCAATTTCTGTTCAAAAGAATTGATCATTTCCTTCAAGAGAAACACAAAAAGCACTCCTCAGAAATCTTCAAGACCAAGTTACTAGGAGAACCAACAGTTGTTCTTTATGGTCCTAATGCAAACAAATTTGTCTCCACCAATGAACCCCAACATGTCAAAGTTTGGTACTTGAGAACACAAAGAATGCTCTTCAATCTTCCTGATCCTGATCAGCCACATGGGAAAAAGGCGGCGAAACAAGACGCCGTTGTAGCCGCAGCTCCGGTGAAGATCTTAGGGTTCTTGAAACCAGAAGGCCTAGTTAGGTACATGGGGTGCAACATTGAGTCCATCATGCAACAACACTTCATGAAAAATTGGGAAGGAAAAACAGAACTAAAGGTTTATCCTCTGGTGAAAAATTTTGCTCTTTCACTAGCCTATCAGTTCTACTTAGGAATTGATGATCCACTCCATGTGGCAAAATTCGGAAGCAAGTTTGATGATTTGTATTCAGGGATTTATGCCGTTCCGGCGAATATTCCGGGGACTACATTTCACAGGGCAATGAAGGCTGCAAATGAAATCAGAGAAGATATTCAATTATTGATCAAGAAGAAGATTGATGATTTATCAAAGGGGATTGTTATGAATGATTTACTAGCACATATAGTTGGTGCTGTTGAGGATGGAAAATATGTGCCAAAAATTGAAATAAGTAACATCATAATGGGATTGATGAATTCTAGCTACACACCAATAGCAATCACACTTGCTTTCATGATCAAACACATTGGATTGGGGCCTCAGCATATCTACCAAAAAATTGTATCTGAGCATGCTGAAATTACAGAATCAAAAGGAGCAGGTGCAGCACTAGATTGGGAAAGCATACAAAAAATGAAATACACATGGTGTGTTGCACAAGAAACCATGAGACTGTACCCAACTGCACCAGGAGCATTCAGAGAGGCAGTTACGGATATCACCTTTGAGGGTTTTACTATTCCGAAGGGTTGGAAGATATTTTGGGCAATGATGGGAACAAATAAGAATGAGAAATACTTTGATGAGGCTGAAAGTTTTGATCCATCAAGATTTGAAGAGAATGTTGCTGGTCCGTACAGTTTCATACCATTTGGTGGTGGAGCAAGGTCTTGCCCTGGAAAAGATTACACAAGGCTTGTGATTCTCACTTTCATTCACAATCTCATAACCAAATTCAGTTGGCAACTTATGCTTCCTCATGAGCAAGTCTTAGGCTCTTTGGTGCCTCTTCCAGCAGAAGGAATTCCCATCCGAATTCGTCACCTCTAA 1440 0.3986 MDFFMQSLLLIMITLLVISIFVLNQKNQSGTKTLPPGTFGWPIVNETYQFLFKRIDHFLQEKHKKHSSEIFKTKLLGEPTVVLYGPNANKFVSTNEPQHVKVWYLRTQRMLFNLPDPDQPHGKKAAKQDAVVAAAPVKILGFLKPEGLVRYMGCNIESIMQQHFMKNWEGKTELKVYPLVKNFALSLAYQFYLGIDDPLHVAKFGSKFDDLYSGIYAVPANIPGTTFHRAMKAANEIREDIQLLIKKKIDDLSKGIVMNDLLAHIVGAVEDGKYVPKIEISNIIMGLMNSSYTPIAITLAFMIKHIGLGPQHIYQKIVSEHAEITESKGAGAALDWESIQKMKYTWCVAQETMRLYPTAPGAFREAVTDITFEGFTIPKGWKIFWAMMGTNKNEKYFDEAESFDPSRFEENVAGPYSFIPFGGGARSCPGKDYTRLVILTFIHNLITKFSWQLMLPHEQVLGSLVPLPAEGIPIRIRHL 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151059g00048 479 SUPERFAMILY Cytochrome P450 33 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151059g00048 479 Gene3D Cytochrome P450 23 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151059g00048 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Stsc151059g00048 479 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151059g00048 479 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151059g00048 479 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151059g00048 479 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151059g00048 479 PANTHER CYTOCHROME P450 26 32 456 - -
Stsc151059g00048 479 CDD CYP90-like 64 476 - -
Stsc151059g00048 479 Pfam Cytochrome P450 222 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151059g00048 Stsc-Chr151059 231070 233251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151059g00048 33 383 Cytochrome P450 AT5G36110 33.333 3.79e-66 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151059g00048 K20667 - tpra:123917065 673.7