Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151059g00036 ATGCTAGACACTGGTGGTGCTGCTGCACCTGACTCTGACCTCACTTTCGACACTGCCAATTGCACGAACCGAAGCTCCATCAGCACCCAAAGCAACTGTAGCACCAGCTTCAGCCGTCTCTCCTTCGACCTCCTCCCCCCATCTTCACCGGAAAATATTTCCCTCAAGCCTCACCGCTCCTCTGACTTTGCCTATTCCGCCATCCTCCGCCGCAAGACCGCCCTCACCTTCCACGACTTCTGCCTCATCCGCCGCATCGGCGCCGGAGACATCGGCACCGTCTACCTCTGCCGCCTCCGCAACGGCGACAGCGAAAACGAAAATGCAGAAGAAAAACTTAATCCGAGCTGCCTGTACGCTATGAAGGTGGTGGACAAAAACGCCGTGGCACTAAAGAAAAAATCAGAGAGAGCCGAAATGGAGAGAAGGATCCTGAAGATGCTGGACCACCCTTTCCTCCCTACGCTGTACGCCGAGTTCGAAGCCTCACACTTCTCTTGCATCGTGATGGAGTTTTGCTCCGGTGGAGACTTGCACTCCCTCCGTCACAAGTTCCCTCACAATCGTTTTCCCTTAACCTCCGCAAGGTTTTATGCTGCTGAAGTGTTGGTTGCATTAGAGTACCTTCACATGCTGGGAATCATCTACAGGGATCTCAAACCCGAGAACGTGTTAGTCAGATCAGACGGTCACATCATGCTCTCCGATTTCGATCTTTCTCTCTGCTCAGATGCAATCCCAGCCGTTCAATCCTCTGATTGCTTCCACGATACTTCCTTCCCATCATCCACATTGCAATACTCTCGGAATCACTCTACACCGTTCTCCTGCTTCCCCAACCGGGTCTTCCGATCACGTAAAGTCCAAACCCTTCAACCGGACCGGCTCTTCGTGGCCGAACCGGTCTCGGCTCGCTCATGCTCTTTCGTTGGGACGCACGAGTACGTGTCGCCGGAGGTAGCAGCCGGTGGATCACACGGAAATGCCGTTGACTGGTGGTCGTTCGGGGTATTCATCTACGAGCTAATATACGGTCGTACGCCGTATGCGGCTCAATCGAACGAAGCTACACTGCGAAACATCATAAAGAAGCCCCTGAGGTTCCCCACGGCCACGCCTTCTAGCGCGCTTGAACAACACGCGCGAGACCTCATCTCCGGTTTGCTTCACAAGGACCCTGGTCAGAGACTGGGTTCGAAGCGAGGCGCTGCTGACGTCAAGAAGCATCCGTTTTTCAAAGGGCTCAACATGGCGCTGATTCGCATGTTGACGCCACCACAAGTCCCCGGATTGAAACGACCCAAAACGACGTCGTGGCGCACAAACGATGATAGTAATGATCTTATCACCAACAGTAACAGACAGTATTCTATGGCGTCCTTTGACTATTTCTTTTGA 1398 0.5336 MLDTGGAAAPDSDLTFDTANCTNRSSISTQSNCSTSFSRLSFDLLPPSSPENISLKPHRSSDFAYSAILRRKTALTFHDFCLIRRIGAGDIGTVYLCRLRNGDSENENAEEKLNPSCLYAMKVVDKNAVALKKKSERAEMERRILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHKFPHNRFPLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVQSSDCFHDTSFPSSTLQYSRNHSTPFSCFPNRVFRSRKVQTLQPDRLFVAEPVSARSCSFVGTHEYVSPEVAAGGSHGNAVDWWSFGVFIYELIYGRTPYAAQSNEATLRNIIKKPLRFPTATPSSALEQHARDLISGLLHKDPGQRLGSKRGAADVKKHPFFKGLNMALIRMLTPPQVPGLKRPKTTSWRTNDDSNDLITNSNRQYSMASFDYFF 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151059g00036 465 FunFam protein kinase PINOID 173 241 - -
Stsc151059g00036 465 SUPERFAMILY Protein kinase-like (PK-like) 57 441 IPR011009 -
Stsc151059g00036 465 Gene3D Phosphorylase Kinase; domain 1 80 438 - -
Stsc151059g00036 465 FunFam serine/threonine-protein kinase D6PK-like 304 430 - -
Stsc151059g00036 465 Pfam Protein kinase domain 306 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151059g00036 465 Pfam Protein kinase domain 83 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151059g00036 465 PANTHER FLIPPASE KINASE 1-RELATED 23 433 - -
Stsc151059g00036 465 Gene3D Transferase(Phosphotransferase) domain 1 177 430 - -
Stsc151059g00036 465 SMART serkin_6 80 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151059g00036 465 FunFam protein kinase PINOID 2 78 172 - -
Stsc151059g00036 465 ProSiteProfiles Protein kinase domain profile. 80 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151059g00036 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151059g00036 Stsc-Chr151059 163793 165417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151059g00036 11 464 AGC Kinase Gene Family AT2G34650 64.565 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Stsc151059g00036 Pkinase 2.8e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151059g00036 - - gmx:100795536 671.003