Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151059g00010 ATGGGAGTGTTCACATTCGTGCTCCGCAAATCCGGCGCCGACTGGACTGCAAAGCAGCACTCCGGCGACATCGAGGACTCCGCCTCCTCCACCTTCGATCTCCAACGCAAGCTCGTCAATGCCGCTCGCGCCGCTGATCCCTCCGGCGCCGTTCAGTCCTCTTTCTCTCTCGTGTCTCCCTCCTCTGCTGTCTTCCAGGTGGTTGTGGGTGGTGCAGTGTTCGTTGGAGGCGGTGCTGTTGCTGCTGCTCCTGCTGGTGGCGCCGCCGCAGAGAGTGCCGCCGCCCCTGCTGCTGAGAAGAAAGAAGAGAAGGTCGAGGAAGAGGAAGATGAAGATTTTGGAATGTCACTCTTTGATTAG 360 0.5944 MGVFTFVLRKSGADWTAKQHSGDIEDSASSTFDLQRKLVNAARAADPSGAVQSSFSLVSPSSAVFQVVVGGAVFVGGGAVAAAPAGGAAAESAAAPAAEKKEEKVEEEEDEDFGMSLFD 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151059g00010 119 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 119 IPR044252 GO:0003735|GO:0005840
Stsc151059g00010 119 MobiDBLite consensus disorder prediction 104 119 - -
Stsc151059g00010 119 MobiDBLite consensus disorder prediction 91 119 - -
Stsc151059g00010 119 Pfam 60s Acidic ribosomal protein 73 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151059g00010 Stsc-Chr151059 46929 47979 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151059g00010 1 68 Cytoplasmic Ribosomal Protein Gene Family AT5G57290 70.588 3.81e-29 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151059g00010 K02942 - qsa:O6P43_022346 97.8265