Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151059g00009 ATGTCCAAACCTTGGGGCAACATCGGAAATTGGGCGGCGGAAGCCGAGCGCGCCGAAGCGGAGGAGAAGGAGGCCGCCGCCGCTGCCGCCGCAAGCTCGCAGAGTTTCCCCAGCCTCAAGGAGGCCGTTAACACGAAGCCTAAGAAGAAGAAGATGACGCTCTCGGAGTTCTCAGGCTACGCCTCCGGTGGCGGTGGCGGCGTCGCGTTGGAGTCCAAGGGGCTTACGCCGGACGAGATGCTTCGTCTCCCGACGGGGCCGAAGGAGCGGTCCGCAGAGGAAATGCAGTTCAACCGGCTCGGCGGCGGGTTCTCATCCTACGGCCGCTCCGGTGGGTCTTCAATGGGCCGCTCGAGGGACCGCGAAGGCAACGGCGACGGTTCCTGGGGCGGAGGGAGGAGATCGTATGGAGGATTGGATGATGAGCGCAGGGGTCCGAGTCCTAGGGTTTCGGATATCGATCAGCCTTCGAGGGCTGACGAGGTGGATAACTGGGCCTCGGTGAAGAAACAGCCCTCGTCGTTCGATTCCGGCCGGCAGAATCGATATGGTTCTCTTGGAAGCGGCGGAGGTGGAGGTGGCATTGGCGGCGGAGGCGGAGGTGGCGGATTTGGTGGCAGCTCTAGAGCTGATGAGGTGGATAATTGGGCATTTGGGAAGAAGCCTATTCCCGCCAGATCTTCAACGTTTGGTTCCGGTTTCCGCGATTCTGGTGGGGAGCAAGATCGCTGGACGAGGGGACCACCACGAGGGGAGCAACCGGATCGCTGGTCGAGAGGACCAGTGCGCGAGGAGCGGCCCAAGTTGGTGTTGGAACCACCGAGAGGCGATGGTTCTGCAAATGAAGCTCCGGTGGTGAAAACTAATAAGCCGAACCCTTTCGGTGCCGCGAGGCCGAGGGAGGAGGTTCTGGCGGAGAAGGGAGTGGATTGGAAGAAGCTGGAAACAGAATTGGAGGCGAAGAAGTCTCCTAGTGGGCCTTCGAGTGCACACTCCAGCAGGCCTTCCAGCGCCCAATCGAATCGCTCTGAAAGTCAGGGCTTGCAGCAGCAGGGACCTGCTGAACCTGTGGCGAAGCCGAAGCCGAAGGTGAATCCTTTTGGCGACGCCAAACCCAGGGAGCTTTTGCTGAAGGAACGAGGTATTGATTGGCGAAAGCTTGATCTTGATTTGGAGCATCGCGCTGTTGACAGGCCTGAGACTGAGGAAGAAAAATTATTAAAAGAAGAAATTGATAATTTGAAGAAGGAAGTTGAGAAAGAGTCTGCTATAAATTCAAATAAAGAATCTTCAAATGAGACTGATGCTGAACAAAGCAGTACACAGGCAATGTTATTGCAGAAAGAGAGGGAGCTGGAACAACTTACCCGTGACTTGGATGACAAAGTTCGTTTTGGGCAGAAAGCTGTTGAAAGGCCAGGTTCATCGGCAGGAATTGGTTATTCTGATAGGCCACATTCTCGATCAAGCTCAATCTCAATTGAGGATTCTAGAGGCGAGTCTGCAGACAGACCTCGATCCCGTGGCACTGGTGATACGTGGGCATATCCAAGTGATGACCAAAGATCATATCAAGGAAGCAGGGACAGGAGAGGGTTTTTGAGTAACAGAGACTTGAATAGGTCAAGGTCAAGAGAGAGATGGTGA 1647 0.5556 MSKPWGNIGNWAAEAERAEAEEKEAAAAAAASSQSFPSLKEAVNTKPKKKKMTLSEFSGYASGGGGGVALESKGLTPDEMLRLPTGPKERSAEEMQFNRLGGGFSSYGRSGGSSMGRSRDREGNGDGSWGGGRRSYGGLDDERRGPSPRVSDIDQPSRADEVDNWASVKKQPSSFDSGRQNRYGSLGSGGGGGGIGGGGGGGGFGGSSRADEVDNWAFGKKPIPARSSTFGSGFRDSGGEQDRWTRGPPRGEQPDRWSRGPVREERPKLVLEPPRGDGSANEAPVVKTNKPNPFGAARPREEVLAEKGVDWKKLETELEAKKSPSGPSSAHSSRPSSAQSNRSESQGLQQQGPAEPVAKPKPKVNPFGDAKPRELLLKERGIDWRKLDLDLEHRAVDRPETEEEKLLKEEIDNLKKEVEKESAINSNKESSNETDAEQSSTQAMLLQKERELEQLTRDLDDKVRFGQKAVERPGSSAGIGYSDRPHSRSSSISIEDSRGESADRPRSRGTGDTWAYPSDDQRSYQGSRDRRGFLSNRDLNRSRSRERW 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151059g00009 548 MobiDBLite consensus disorder prediction 167 184 - -
Stsc151059g00009 548 MobiDBLite consensus disorder prediction 450 468 - -
Stsc151059g00009 548 MobiDBLite consensus disorder prediction 1 379 - -
Stsc151059g00009 548 MobiDBLite consensus disorder prediction 322 352 - -
Stsc151059g00009 548 MobiDBLite consensus disorder prediction 415 548 - -
Stsc151059g00009 548 MobiDBLite consensus disorder prediction 489 507 - -
Stsc151059g00009 548 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 358 547 IPR010433 GO:0003743
Stsc151059g00009 548 MobiDBLite consensus disorder prediction 427 447 - -
Stsc151059g00009 548 MobiDBLite consensus disorder prediction 239 272 - -
Stsc151059g00009 548 MobiDBLite consensus disorder prediction 523 548 - -
Stsc151059g00009 548 MobiDBLite consensus disorder prediction 300 320 - -
Stsc151059g00009 548 Coils Coil 404 424 - -
Stsc151059g00009 548 MobiDBLite consensus disorder prediction 136 165 - -
Stsc151059g00009 548 Pfam Plant specific eukaryotic initiation factor 4B 1 530 IPR010433 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151059g00009 Stsc-Chr151059 40610 44957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151059g00009 1 548 Eukaryotic Initiation Factors Gene Family AT3G26400 55.088 4.51e-144 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151059g00009 - - aip:107631697 733.021