Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151058g00036 ATGGCGGCTGGTAGACATGGCGGCTATCGTGACAACGAGTTTAGGGACCGTGAGTCGAATTTGGATGTTTCAAGGCGCGGTTTCGCGAATTCGAAGGAAGATTATGACCGGGCTAGGAATGGAGGACGTGATGTTGTGAGGGGTGGCAGCAGGGATGCAAGAGATAAGATTAGGGTTAGGCAGAAGGATATTAGGGAGAGAGATGCTTCCAATGGAAGTCACCGGTCATCTTCTAGTAGGAGTGATTCTGGCAGCAGCGTGGGTGGCGGTAGCGATGGTGGCGGGCTTGGCCCCCGAAGGTGTGGCTTTTCTGCCAAGACCATGGATAGGGAGCCTGGTGAACTTTCCAGTGAGAGTGGGTCTGATGGTGCTATTGAATCAGAGTCAGCGATGAAAGACAGTGAGGTTGCAAATGTTGAACACAATAGGACTCGATCCCCACCCTCACCAGAGAAGAAAAGAAAGTTTTCACCGATTGTGTGGGATCAGGATGACAAGGAAGTGAACGAGCCATCTAAATCCAAATCTAAGGTTTCCACTGCTGCAGTGACCGCTCTACCACCCCCGCCTCCACTGCCAAAATCATTCGAGCGCTCACCCAGTGTTCCATACGGTGGAGTTGAGATACACCCTGTTAAAAAGAGAGAAACTGAGGATGTTGAATTGCGGGAAGAAGCTACTAAGGCCACTTTGCCATCTCCGGGATCACATTACATATCTCCAAAACAGGCTTGGCATAATGGTCGCGAAGCTGAGCAGCCAGAAGGTGAGGAGGATTTTGTTCCTAGTCGAAATATATCATCTTCGAGATGGGCAGCTGTAGATAACTCTCCCGGTGATGAGGGTGAAATCATCGATGATGAGGAATTGCCTAGGAGGAAGAGGAGGCTGTCTCCAGAGTTGTTGGATACAAGACTAAGGGACAAGCTATTGAGCCCAGTGGAATCTAAAAGAGAAGGATTTGATGTTGGCAGGCCTAAATCATCTGAATCCGATGAACGAGGTAGTCATGGGAGAACGTCCAGTGGGGATGATCATCCTGGAACTGCATCAGAGAAGGATGACTACATGGAGATTGATGCTCAAGGTGGAAAAAGTGATACCAGTATCAGTCATTCTGNNNNNNNNNNAGATTCTGAGGATGAAGATGATAGGAGGGAGACTCCAGAACCTCCAGCACCACCGCAAAGAATGGTTAACATGCTTCAAGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTTAACAAGATAGATGAAGGAACTTATGGTGTTGTATATAGGGCCAGAGATAAGAAGACTGGAGAAATTGTAGCATTGAAGAAAGTCAAGATGGAGAAGGAAAGAGAAGGATTCCCACTGACTTCACTTAGGGAAATAAACATTCTTCTTTCTTTCCACCACCCATCCATAGTTGATGTTAAGGAAGTAGTGGTAGGAAGTAGTCTTGATAGTATTTTCATGGTTATGGAATACATGGAACATGATCTTAAAGGTCTAATGGAAGCAATGAAGCAACCATTTAGCCAGAGTGAAGTAAAATGCTTAATGATCCAGCTTTTAGAAGGTGTTAAGTATCTTCATGATAACTGGGTGCTTCATAGGGATTTAAAAACTTCTAACCTCCTTTTGAATAATAGAGGTGAGCTAAAAATATGTGATTTTGGGTTAGCTCGACAGTATGGGAGTCCATTGAAACCATACACACACCTGGTGGTTACTCTTTGGTACAGGGCACCTGAACTTCTTCTGGGGTCCAAACAATATTCAACAGCCATTGACATGTGGTCTCTAGGTTGTATAATGGCGGAGCTATTGTCCAAAGAACCACTATTCAATGGGAAAACAGAATTTGATCAGCTTGATAAGATTTTTAAGATTCTTGGCACACCAAACGAAACAATTTGGCCTGGGTTCTCAAAATTACCTGGAGTCAAGGTCAATTTTGTCAAGCACCAGTATAACCTCCTGCGCAAAAAGTTTCCTGCCACATCATTCACTGGTTCCCCGGTCCTTTCTGATGCTGGATTTGATTTGCTGAACAAGCTTCTTACTTATGACCCTGAAAAGCGGATCACAGCTGAAGCTGCTCTCAATCATGAATGGTTCCGTGAAGTTCCTCTTCCCAAGAGTAAAGAATTTATGCCTACCTTTCCTGCTCAGCATGCTCAAGACAGGCGGATGCGGAGAGTATTAAAGAGTCCGGATCCTCTAGAGGAGCAGCGCCGTAAGGAGTTGCAGCAGGGTGAATCAGGCACTGGTGGAATTTTTGGCTAG 2274 0.4538 MAAGRHGGYRDNEFRDRESNLDVSRRGFANSKEDYDRARNGGRDVVRGGSRDARDKIRVRQKDIRERDASNGSHRSSSSRSDSGSSVGGGSDGGGLGPRRCGFSAKTMDREPGELSSESGSDGAIESESAMKDSEVANVEHNRTRSPPSPEKKRKFSPIVWDQDDKEVNEPSKSKSKVSTAAVTALPPPPPLPKSFERSPSVPYGGVEIHPVKKRETEDVELREEATKATLPSPGSHYISPKQAWHNGREAEQPEGEEDFVPSRNISSSRWAAVDNSPGDEGEIIDDEELPRRKRRLSPELLDTRLRDKLLSPVESKREGFDVGRPKSSESDERGSHGRTSSGDDHPGTASEKDDYMEIDAQGGKSDTSISHSXXXXDSEDEDDRRETPEPPAPPQRMVNMLQGCRSVDEFERLNKIDEGTYGVVYRARDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMIQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFKILGTPNETIWPGFSKLPGVKVNFVKHQYNLLRKKFPATSFTGSPVLSDAGFDLLNKLLTYDPEKRITAEAALNHEWFREVPLPKSKEFMPTFPAQHAQDRRMRRVLKSPDPLEEQRRKELQQGESGTGGIFG 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151058g00036 757 Pfam Protein kinase domain 411 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151058g00036 757 MobiDBLite consensus disorder prediction 209 226 - -
Stsc151058g00036 757 Gene3D Phosphorylase Kinase; domain 1 396 493 - -
Stsc151058g00036 757 ProSiteProfiles Protein kinase domain profile. 411 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151058g00036 757 SUPERFAMILY Protein kinase-like (PK-like) 403 708 IPR011009 -
Stsc151058g00036 757 FunFam Cyclin-dependent kinase G-2 494 733 - -
Stsc151058g00036 757 MobiDBLite consensus disorder prediction 724 746 - -
Stsc151058g00036 757 MobiDBLite consensus disorder prediction 286 361 - -
Stsc151058g00036 757 MobiDBLite consensus disorder prediction 8 73 - -
Stsc151058g00036 757 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672|GO:0006468
Stsc151058g00036 757 MobiDBLite consensus disorder prediction 133 173 - -
Stsc151058g00036 757 PANTHER CELL DIVISION PROTEIN KINASE 409 708 - -
Stsc151058g00036 757 MobiDBLite consensus disorder prediction 1 398 - -
Stsc151058g00036 757 MobiDBLite consensus disorder prediction 376 391 - -
Stsc151058g00036 757 MobiDBLite consensus disorder prediction 724 757 - -
Stsc151058g00036 757 CDD STKc_CDC2L1 405 702 IPR045267 GO:0004674|GO:0005524|GO:0006468
Stsc151058g00036 757 FunFam cyclin-dependent kinase G-2 isoform X1 396 493 - -
Stsc151058g00036 757 MobiDBLite consensus disorder prediction 74 88 - -
Stsc151058g00036 757 SMART serkin_6 411 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151058g00036 757 Gene3D Transferase(Phosphotransferase) domain 1 494 735 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151058g00036 Stsc-Chr151058 190719 194245 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151058g00036 402 748 Core Cell Cycle Gene Families AT5G10270 44.211 2.69e-95 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Stsc151058g00036 Pkinase 1.3e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151058g00036 K08818 - gmx:100792524 1140.18