Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151058g00020 ATGGAAATGGAGTTAATATACAAAGAAAGCATGAAACCAAGTTCAGCAACTCCTCCACACCTCAAAACTTATCCCCTCTCCTTCATGGATGTGACAACTCCTCCCCAATACATGCCAGTGCTTTACTTTTACAATACAAAACAAATTGAAAAGCAAGAATCCAAGTTAGCCCTGCTCAAGAAATCCTTACAGGAAGCTCTCTCAGTGTACTATCCAATTGCAGGCAGGTTGAAAGGTCGACTCATCGTTGACTGCAACGACGAAGGAGTGCCATTGCTCATCACAAAACTCAAATGCCATCTCTCACACTTTCTCAACAACCCAATCACGCCTAACCTTCTTCCTCTCTTCCCGGACAATCTTGCATGGAGCGATATGAACAATCCAGAGCATGATCCCATCATGGCCATTCAAATCAACTGCTTCCAATGCGGCGGAATCGCAATCGCAATCTGCCTCTCTCACAAGTTCGGCGACATGCCCACTCTCTTCAACTTCGTCAACCACTGGGCCGCCATCACCAGCCACCACCAAGATCAGAACAAGCCACTACCTTCTCCGCCCTTACTGGACGCAGGGGTTTCGGTTTTTCCTCAAGGAAACCTTCCGGTATACCGCGAAAAGCCATTCTACGCTCTCCCGAAATCGGTTTGCAAGAGGTTCGTGTTCGAAGCTTCCAAGATCGAAGCCCTCAAAGCCATGGCTGGACCAACTCAACCGACAAGGTTTCAAGCAGTGGCAGCACTGATTTATAAGTGTGCGGTTTCTGCACTAAGCCCTAACTCCCCGTTGTTAAGTTCCATTTCCGTGAATCTCCGGAAGAGGATCGATCCTCCTGTTCCTTGCAACACCTTAGGGAACATGTTTTCGTTCTTCATTTTAATGATCTCTCAGAGGGATGAGCTAGCGGAGTTGGTAAGCAAGATGAAAGAGGGGATGATTCGAAGTGAAATGGAGTATAAGAAGCATGGAGGAAAGCACAGGGACTTGGATTTCATAGCTGAGACACTGAAACGAGGGGCGGAGGCTCCGCCGCTGGAGGCTTTGAAGTTTCCGATGATCGGACTGACTAGTTTGTGCGGGCTTTCAATGTACGAGGCGGATTTTGGGTGGGGGAAACCCGCATGGATAGCGTCCGTTATTACGAATTTTCAGAACGGTGTGATATTTATGGATGCGAGAGATGGAAAAGGGATGGAAGTGATTGTGAACATGAAAGAGGAGCACATGGCAAAGTTTGAATGCAACCAGGACCTGCTTCAATATGCCGATCTTGACCCGCCAGTTCAACTCTACTGA 1299 0.4781 MEMELIYKESMKPSSATPPHLKTYPLSFMDVTTPPQYMPVLYFYNTKQIEKQESKLALLKKSLQEALSVYYPIAGRLKGRLIVDCNDEGVPLLITKLKCHLSHFLNNPITPNLLPLFPDNLAWSDMNNPEHDPIMAIQINCFQCGGIAIAICLSHKFGDMPTLFNFVNHWAAITSHHQDQNKPLPSPPLLDAGVSVFPQGNLPVYREKPFYALPKSVCKRFVFEASKIEALKAMAGPTQPTRFQAVAALIYKCAVSALSPNSPLLSSISVNLRKRIDPPVPCNTLGNMFSFFILMISQRDELAELVSKMKEGMIRSEMEYKKHGGKHRDLDFIAETLKRGAEAPPLEALKFPMIGLTSLCGLSMYEADFGWGKPAWIASVITNFQNGVIFMDARDGKGMEVIVNMKEEHMAKFECNQDLLQYADLDPPVQLY 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151058g00020 432 Gene3D - 1 203 IPR023213 -
Stsc151058g00020 432 PANTHER F21J9.9 4 423 - -
Stsc151058g00020 432 Pfam Transferase family 2 418 - -
Stsc151058g00020 432 Gene3D - 214 424 IPR023213 -
Stsc151058g00020 432 Coils Coil 49 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151058g00020 Stsc-Chr151058 94871 96392 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151058g00020 1 414 Monolignol Biosynthesis Gene Families AT5G48930 23.810 3.54e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151058g00020 - - adu:107481923 687.567