Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151058g00019 ATGGAAATGGAGTTAGTATACAAAGAAAGCATGAAACCAAGTTCAGCAACTCCTCCACACCTGAAAACCTATCCCCTCTCCTTCATGGATGTGACAACTCCTCCCCAATACATGCCAGTGCTTTACTTTTACAGTCCACAACAAATTGAAAAGCAAGAATCCAAGTTAGCCCTGCTCAAGAAATCCTTACAGGAAGCTCTCTCAGCGTACTATCCAATTCCAGGCAGGTTGAAAGGTCAACTCGCCATTGACTGCAACGACGAAGGAGTGCCATTGCTCATCACAAAACTCAAATGCCATCTCTCACACTTTCTCAACAACCCAACCACACCTAACCTTCTTCCTCTCTTCCCGGACAATCTTGCATGGAGCGATATGAACAATCCGGATCATGATCCCATCATGGCCATTCAAATCAACTGCTTCCAATGCGGCGGAATCGCAATCGCAGTCTGCCTCTCTCACAAGTTCGGCGACATTTCCACTCTCTTCAACTTTGTCAACCACTGGGCCGCCATCACCAGCCACCACCAAGATCAGAACAAGCCACTACCTTCTCCGCCCTTACTCGACGCAGGAGTATCAATTTTTCCACAAGGAAACCTTCCGGTTTACCGCGAAAAGCCCTACTACGCTCTCCCGAAATCGGTCTGCAAGAGGTTCGTGTTCGAAGCTTCCAAGATCCAAGCCCTCAAAGCCATGGCTGGACCAATTCAACCGACAAGGTTTCAAGCAGTGGCAGCTCTGATTCATAAATGTGCAGTTTCTGCACTAAGCCCTAATAACTCCCCAGTGTTTACCTGCATTTCCGTGAATCTCCGGAAGAGGATCGATCCTCCTGTTCCTAGCAACACCTTAGGGAACATGGTTTTGTTCTACATGTTTATGATCTCCGAAAAGGATCAGCTAGCGGAGTTGGTAAGCAAGATGAAAGAGGGGATGATTCAAAATGAGATGGAGTGGAAGAAGTATGGAGGAAAGTACAGGGACTTGGATTTCATCGCTGAGGCACTGAAACGTTGGTCGGATGCTCCGCCGCCGGGGGCTTTGAAGTTTCCGATTCTTGTGCATTCTAGTTGGGGCGGGTTTTCAATGTACGAGGCGGATTTTGGGTGGGGGAAACCGGCGTGGATAGCGTCCGTTACGAATTTTGAGAACGGTGTGGTTTGTATGGATGCGAGAGATGGAAAAGGGATGGAAGTGATTGTGAACATGGAAGAGCAGAACATGGCAAAGTTTGAGTGCAACCAGGAATTGCTTCAATATGCCTCTCTTGACCCATCCGTTCAACTCTAA 1296 0.4792 MEMELVYKESMKPSSATPPHLKTYPLSFMDVTTPPQYMPVLYFYSPQQIEKQESKLALLKKSLQEALSAYYPIPGRLKGQLAIDCNDEGVPLLITKLKCHLSHFLNNPTTPNLLPLFPDNLAWSDMNNPDHDPIMAIQINCFQCGGIAIAVCLSHKFGDISTLFNFVNHWAAITSHHQDQNKPLPSPPLLDAGVSIFPQGNLPVYREKPYYALPKSVCKRFVFEASKIQALKAMAGPIQPTRFQAVAALIHKCAVSALSPNNSPVFTCISVNLRKRIDPPVPSNTLGNMVLFYMFMISEKDQLAELVSKMKEGMIQNEMEWKKYGGKYRDLDFIAEALKRWSDAPPPGALKFPILVHSSWGGFSMYEADFGWGKPAWIASVTNFENGVVCMDARDGKGMEVIVNMEEQNMAKFECNQELLQYASLDPSVQL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151058g00019 431 Pfam Transferase family 2 419 - -
Stsc151058g00019 431 PANTHER F21J9.9 5 424 - -
Stsc151058g00019 431 Gene3D - 1 203 IPR023213 -
Stsc151058g00019 431 Coils Coil 49 69 - -
Stsc151058g00019 431 Gene3D - 214 423 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151058g00019 Stsc-Chr151058 84298 85840 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151058g00019 1 414 Monolignol Biosynthesis Gene Families AT5G48930 22.727 9.11e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151058g00019 - - adu:107481923 690.263