Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151058g00018 ATGGAAATGGAAGTGGTATCAAGAGAAAGCATCAAACCATCTTCCCCCACTCCCCCTCACCTCTCAACCTACCCTCTCTCCTTGTTCGACAATGCCGCTGCTCCAAACTCAGTCCCATTAATTTACTTTTATGCCCCCAACCCCAAGCAATTTCCTGACGAAGCCACCAGAATCTCGTTTCTCAAGAAATCCCTATCCCAAGTCCTATCCATGTACTACCCTTTCGCCGGCAGGTTCAAAGACCCACTCTCGCTACACTGCAACGACCAAGGAGCCTCCCTTCTCGTCACAAGAATCAAAACCACCACTCTCTCTCACATTCTCCGCAACCCAACTGACTCTCTCTTGAACCCTTTGTTTCCCGACGAGCTGCAGTGGAAGGACATGGGATTGGAATCCAGTTTGTTGGCCGTTCAAATTAACTGTTTCTCCTGCGGCGGAATGGCCGTAACCGTTTGCATGTCTCACAAGATTGGTGACGCTTCCACTTTGTTCAACTTCTTCAACGATTGGTCAACGCTCACCCGGGAGTACTCTTATACCCAACAACCTCACATCACAATAGCCTTACCCCATGTTGGAGCTTCTTCGCTTTTCCCACAAAACCACTTCCCACTTCCCCGCCAATTTTCCTTCGTCCCTCACCACAACATGGTGTGTAGAAGGCTTGTGTTCGAAGGATCTAAAATTGATTCCCTTAAGGCCTTGTGTTCTGAGAAGGTGGAGAAGCCTACTAGGTTTGAGGTTGTGGTTGCACTGATTTACAAGTGTGGTGTTTCGGCGTTGGGATTGAGTGTTAGGAACATGCTCTTACGTGTTGCTATCAACTTGCGCAGCAGAATTGTTCCTCCGCTGCCGGAGAAGTCCTTAGGGAACTTGGCTTGGAGCTTCTATGCATCCTCCATGGACAAGAATAATGATGAAGTGGAGTTGCACGAGGTGGTGACCAAAACAAGAGAAGGGCTATCTCTGTTCTGTGACAAGTATGTTAGAAACTTTGGAGACTTGAAATTCGTGTCGGAGTTCCTACGATTTGGACGAGCTGTTACTAATAATAATAATAAGAGTTGTGAGGATGGGGAGGAGAAGAAGAAAGATATGATGTTTTTCTCTGGGTGGTGTAGGTTTAAGGCGTATGAAGCGGATTTTGGGTGGGGGAATCCAGTGTGGGTGACCACTGGTGTGTGTCCTGTGAAGAACAGCGTGGTTTTGATGGATACCAGAGACGGGAAAGGGATTGAAGCGGTTGTGTGCATGCTTGACAAAGACATGGCCATGTTTGAGTCTCATCCTGATCTTCTTCGCTATGCTTCTCTTGAACCAAACCGTTGGGCATGCTCTTCTTCATGA 1350 0.477 MEMEVVSRESIKPSSPTPPHLSTYPLSLFDNAAAPNSVPLIYFYAPNPKQFPDEATRISFLKKSLSQVLSMYYPFAGRFKDPLSLHCNDQGASLLVTRIKTTTLSHILRNPTDSLLNPLFPDELQWKDMGLESSLLAVQINCFSCGGMAVTVCMSHKIGDASTLFNFFNDWSTLTREYSYTQQPHITIALPHVGASSLFPQNHFPLPRQFSFVPHHNMVCRRLVFEGSKIDSLKALCSEKVEKPTRFEVVVALIYKCGVSALGLSVRNMLLRVAINLRSRIVPPLPEKSLGNLAWSFYASSMDKNNDEVELHEVVTKTREGLSLFCDKYVRNFGDLKFVSEFLRFGRAVTNNNNKSCEDGEEKKKDMMFFSGWCRFKAYEADFGWGNPVWVTTGVCPVKNSVVLMDTRDGKGIEAVVCMLDKDMAMFESHPDLLRYASLEPNRWACSSS 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151058g00018 449 Gene3D - 1 205 IPR023213 -
Stsc151058g00018 449 Pfam Transferase family 2 432 - -
Stsc151058g00018 449 Gene3D - 215 434 IPR023213 -
Stsc151058g00018 449 PANTHER F21J9.9 4 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151058g00018 Stsc-Chr151058 73547 75305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151058g00018 1 428 Monolignol Biosynthesis Gene Families AT5G48930 22.870 5.89e-21 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151058g00018 - - gmx:100806928 455.292