Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc151058g00015 | ATGCCATCTATTTCCTCAAAAGAAAGGATAGCTTCTCTAAGAGAATTCTATGCTGTAATATACCCTTCGCTCCGATTACTCGAAGGCGAGTTCAATGTGTCAAGAATCAGAGAACATAGAAGCAGCTGCAGCAGCCAAATTGTGAGCAGAAAAAGGCTTGAAAAGTTTATTGATGAAGATCAAGAGGGAGGAGATGATGAATGTGACATATGCATGGAGAAGAGCAGGAAGATGGTGCTTCCTAATTGTGTTCATTCCTTGTGCATTAGCTGCTTCCATGATTGGTATTTGAGATCAGAATCATGTCCATTTTGCCGTGGGAGCTTGAAAAGGGTTAGTTCTACAGATTTATGGGAGGTTATTGGGGACAGTGATGTAATTGACAGAGCTACACTTGCAATGGATAATATAAGACGTTTCTATCTTTTCATGGAAACTTTGCCACTTAATATCCCTGAAGCACATGTCTATGCATTTAACTACATGCTATGA | 492 | 0.3984 | MPSISSKERIASLREFYAVIYPSLRLLEGEFNVSRIREHRSSCSSQIVSRKRLEKFIDEDQEGGDDECDICMEKSRKMVLPNCVHSLCISCFHDWYLRSESCPFCRGSLKRVSSTDLWEVIGDSDVIDRATLAMDNIRRFYLFMETLPLNIPEAHVYAFNYML | 163 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc151058g00015 | 163 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 48 | 117 | IPR013083 | - | |
Stsc151058g00015 | 163 | PANTHER | RING FINGER PROTEIN 41, 151 | 3 | 159 | - | - | |
Stsc151058g00015 | 163 | Pfam | Zinc finger, C3HC4 type (RING finger) | 65 | 111 | - | - | |
Stsc151058g00015 | 163 | SUPERFAMILY | RING/U-box | 53 | 111 | - | - | |
Stsc151058g00015 | 163 | SMART | ring_2 | 68 | 105 | IPR001841 | - | |
Stsc151058g00015 | 163 | ProSiteProfiles | Zinc finger RING-type profile. | 68 | 106 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc151058g00015 | Stsc-Chr151058 | 66165 | 67575 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc151058g00015 | 13 | 118 | RAD5 or RAD16-like Gene Family | AT5G05130 | 30.088 | 3.83e-08 | 50.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc151058g00015 | - | - | gmx:100805014 | 222.631 |