Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151058g00013 ATGATTGTAAGGGCACCCTCAAATTCCATTGATGTTTGTGTGTGTTGTGCCACAACTGGTTCTCCTTTTATATCTACTCTTGAGCTTAGACCCTTGAATCTTTCTATGTATGCCACTGATTATGAGGATAATTACTTCTTGAAAGTAGCTGCAAGAATCGATTTTGGTGCTCCAAGTGAGGCATCTCTCAGGTACCCTGATGATCCATATGATAGAATTTGGGATTCTGATCTTGCTAGAAGGCAAAATTTTCTTGTAGGGGTGGCACCTGGAACAGAGAGAATTAGTACTACAAAGAACATAGATATAGGGACAAGAGAGTATCCACCTGTTAGAGTTATGCAAACTGCAGTTGTTGGCACAAAAGGTGTACTTAGCTATAGGTTGAATTTAGAAGATTTCCCTGCCAATGCTCGCGCATATGCATATTTCGCGGAGATTGAAGATCTTGGTAAGAATGAGGTTAGGAAATTCAAGTTGAAGCAGCCTTATATACCTGACTATAGCAATGCAGTTGTTAACATTGCTGAGAATGTCAATGGTAGCTACATTCTTTATGAACCAAGTTACATGAATGTGAGTCTGGATTTTGTTCTGTCATTCGAATTTGTTGAGACCGCGGATTCTACTCGAGGACCTCTCCTTAATGCAATGGAAATAAGCAAATATGTATGGATTGCTTCAAAGACTGACAGGCAAGATTCAACTGTTGTAAATGCATTGCAATCGGCGTCTGCTGAAAGTCTGCAAATGAATGAAGGTGATCCTTGTGTACCAACTCCCTGGGAGTGGATAAATTGTAGTGCCACTACACCTCCAAGAATTTCAAAAATAGTTCTATCAAGAAGGAATGTGACAGGTGAAATCCCACCTGAACTGAACAACATGGATGCTTTGACAGAGTTGTGGTTAGATGGAAACTCACTTACAGGAACACTACCTGACATAAGCAATCTTATAAATCTAAAGATTGTGCATTTAGAGAACAACAAATTGACTGGTCCTCTACCATCTTACCTGGGTAGTTTGCCAAGTTTACAAGCATTGTTCATACAGAACAATTCATTTAGTGGGGAAATACCAGCCAGATTATTATCTGGAAAAATTGTTTTCAGCTATGATGGTAATATTGGACTATACAGAGGGAGCAAGAAGCATTTCAAGTTGATACTGGGAGTTTTAGTTGGTGTATTAGCAATTCTATTACTATTGTTCTTAGGTACTTTAGTACTAGTGTTGTGGAGAAAGAAATCTCAAATGAGACAAAAAGGTGTTTCTGCACACAATAGCACTAAACCTTCAACTGCACATTCATTGGTTCGAGGGAATTTAAAGGATGAAGGTACCACTTGCTATATAGCACTTGCAGATTTGAAAGAAGCTACTGATGACTTTTCGAAGAAAATTGGCAAAGGAAGCTTTGGATCTGTTTATTATGGGAGAATGAAAGATGGAAAAGAGGTTGCAGTTAAGACTATGACTGATTCATCCAGCCATGGGAACCGCCAATTTGTTAATGAGGTAGCCCTCTTATCAAGAATTCATCACAGGAACTTGGTTCCTCTGATTGGATACTGTGAAGAAGAATATCAGCATCTTCTGGTTTATGAGTATATGCACAATGGCACTTTAAGGGATCACCTTCATGAACCTTCCAAGCAAAAGAACTTAGACTGGTTAGCTCGTCTTCGCATTGCAGAAGATGCAGCCAAAGGTTCAATAGTAACTACCTTTCTCAGTCCATTATGTTCTTCCAAGTTAACAGTTGAAGAAACAGACTTTGTTTTCTACAGGTCTTGA 1800 0.3906 MIVRAPSNSIDVCVCCATTGSPFISTLELRPLNLSMYATDYEDNYFLKVAARIDFGAPSEASLRYPDDPYDRIWDSDLARRQNFLVGVAPGTERISTTKNIDIGTREYPPVRVMQTAVVGTKGVLSYRLNLEDFPANARAYAYFAEIEDLGKNEVRKFKLKQPYIPDYSNAVVNIAENVNGSYILYEPSYMNVSLDFVLSFEFVETADSTRGPLLNAMEISKYVWIASKTDRQDSTVVNALQSASAESLQMNEGDPCVPTPWEWINCSATTPPRISKIVLSRRNVTGEIPPELNNMDALTELWLDGNSLTGTLPDISNLINLKIVHLENNKLTGPLPSYLGSLPSLQALFIQNNSFSGEIPARLLSGKIVFSYDGNIGLYRGSKKHFKLILGVLVGVLAILLLLFLGTLVLVLWRKKSQMRQKGVSAHNSTKPSTAHSLVRGNLKDEGTTCYIALADLKEATDDFSKKIGKGSFGSVYYGRMKDGKEVAVKTMTDSSSHGNRQFVNEVALLSRIHHRNLVPLIGYCEEEYQHLLVYEYMHNGTLRDHLHEPSKQKNLDWLARLRIAEDAAKGSIVTTFLSPLCSSKLTVEETDFVFYRS 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151058g00013 599 Pfam Malectin-like domain 2 222 IPR024788 -
Stsc151058g00013 599 ProSitePatterns Protein kinases ATP-binding region signature. 469 491 IPR017441 GO:0005524
Stsc151058g00013 599 FunFam serine/threonine-protein kinase PBS1-like 434 538 - -
Stsc151058g00013 599 ProSiteProfiles Protein kinase domain profile. 463 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151058g00013 599 Gene3D Transferase(Phosphotransferase) domain 1 447 573 - -
Stsc151058g00013 599 Pfam Protein tyrosine and serine/threonine kinase 465 572 IPR001245 GO:0004672|GO:0006468
Stsc151058g00013 599 PANTHER OS07G0107800 PROTEIN-RELATED 2 337 - -
Stsc151058g00013 599 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 270 360 - -
Stsc151058g00013 599 Gene3D Ribonuclease Inhibitor 229 371 IPR032675 -
Stsc151058g00013 599 SUPERFAMILY L domain-like 258 364 - -
Stsc151058g00013 599 SUPERFAMILY Protein kinase-like (PK-like) 452 572 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151058g00013 Stsc-Chr151058 59285 63526 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151058g00013 1 572 Receptor kinase-like Gene Family AT1G67720 68.000 0.0 792
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Stsc151058g00013 Malectin_like 2.5e-51 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151058g00013 - - gmx:100809222 909.057