Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151058g00012 ATGATTGTAAGGGCACCCTCAAATTCCATTGATGTTTGTGTGTGTTGTGCCACAACTGGTTCTCCTTTTATATCTACTCTTGAGCTTAGACCCTTGAATCTTTCTATGTATGCCACTGATTATGAGGATAATTACTTCTTGAAAGTAGCTGCAAGAATCGATTTTGGTGCTCCAAGTGAGGCATCTCTCAGGTACCCTGATGATCCATATGATAGAATTTGGGATTCTGATCTTGCTAGAAGGCAAAATTTTCTTGTAGGGGTGGCACCTGGAACAGAGAGAATTAGTACTACAAAGAACATAGATATAGGGACAAGAGAGTATCCACCTGTTAGAGTTATGCAAACTGCAGTTGTTGGCACAAAAGGTGTACTTAGCTATAGGTTGAATTTAGAAGATTTCCCTGCCAATGCTCGCGCATATGCATATTTCGCGGAGATTGAAGATCTTGGTAAGAATGAGGTTAGGAAATTCAAGTTGAAGCAGCCTTATATACCTGACTATAGCAATGCAGTTGTTAACATTGCTGAGAATGTCAATGGTAGCTACATTCTTTATGAACCAAGTTACATGAATGTGAGTCTGGATTTTGTTCTGTCATTCGAATTTGTTGAGACCGCGGATTCTACTCGAGGACCTCTCCTTAATGCAATGGAAATAAGCAAATATGTATGGATTGCTTCAAAGACTGACAGGCAAGATTCAACTGTTGTAAATGCATTGCAATCGGCGTCTGCTGAAAGTCTGCAAATGAATGAAGGTGATCCTTGTGTACCAACTCCCTGGGAGTGGATAAATTGTAGTGCCACTACACCTCCAAGAATTTCAAAAATAGTTCTATCAAGAAGGAATGTGACAGGTGAAATCCCACCTGAACTGAACAACATGGATGCTTTGACAGAGTTGTGGTTAGATGGAAACTCACTTACAGGAACACTACCTGACATAAGCAATCTTATAAATCTAAAGATTGTGCATTTAGAGAACAACAAATTGACTGGTCCTCTACCATCTTACCTGGGTAGTTTGCCAAGTTTACAAGCATTGTTCATACAGAACAATTCATTTAGTGGGGAAATACCAGCCAGATTATTATCTGGAAAAATTGTTTTCAGCTATGATGGTAATATTGGACTATACAGAGGGAGCAAGAAGCATTTCAAGTTGATACTGGGAGTTTTAGTTGGTGTATTAGCAATTCTATTACTATTGTTCTTAGGTACTTTAGTACTAGTGTTGTGGAGAAAGAAATCTCAAATGAGACAAAAAGGTGTTTCTGCACACAATAGCACTAAACCTTCAACTGCACATTCATTGGTTCGAGGGAATTTAAAGGATGAAGGTACCACTTGCTATATAGCACTTGCAGATTTGAAAGAAGCTACTGATGACTTTTCGAAGAAAATTGGCAAAGGAAGCTTTGGATCTGTTTATTATGGGAGAATGAAAGATGGAAAAGAGGTTGCAGTTAAGACTATGACTGATTCATCCAGCCATGGGAACCGCCAATTTGTTAATGAGGTAGCCCTCTTATCAAGAATTCATCACAGGAACTTGGTTCCTCTGATTGGATACTGTGAAGAAGAATATCAGCATCTTCTGGTTTATGAGTATATGCACAATGGCACTTTAAGGGATCACCTTCATGAACCTTCCAAGCAAAAGAACTTAGACTGGTTAGCTCGTCTTCGCATTGCAGAAGATGCAGCCAAAGGTCTTGAATACTTGCACACAGGATGCAATCCCAGTATCATTCACCGAGATGTAAAGACGAGCAATATTCTTATAGACATCAATATGAGAGCAAAAGTATCAGATTTTGGACTCTCTAGGCTAGCCGAAGAAGATTTAACTCACATATCAAGCATTGCAAGGGGGACCATAGGTTACCTCGATCCTGAGTACTATGCAAATCAACAGTTGACAGAGAAGAGTGATGTGTATAGTTTTGGAGTTGTCCTGCTGGAACTGATATCTGGAAGAAAGCCTGTGTCACCAGAAGATTATGGTGATGATATGAATATTGTTCACTGGGCAAGACCTTTAATCCGAAAAGGGGATGTGATGAGTATGATTGACCCTTGCATAGCAGGGAATGCCAAGATTGAATCCATTTGGAGGGTTGTTGAGATTGCTATGCAATGTGTGCAGCAGCATGGTGCATCAAGGCCAAGGATGCAAGAAGTGATTTTGGCTATACAAGATGCTACCAAGATTGAAATAGAAGCACAAAATAAGGTAAAATCATCATCATCACCATCAACTTCAAGAAAACCACAGTCTTCCAGGAAAACTTTACTCACAAGCTTTCTTGAAATTGAGAGCCCAGACTTCTCAAGTGGTTGCCTCCCATCAGCAAGATAA 2364 0.3981 MIVRAPSNSIDVCVCCATTGSPFISTLELRPLNLSMYATDYEDNYFLKVAARIDFGAPSEASLRYPDDPYDRIWDSDLARRQNFLVGVAPGTERISTTKNIDIGTREYPPVRVMQTAVVGTKGVLSYRLNLEDFPANARAYAYFAEIEDLGKNEVRKFKLKQPYIPDYSNAVVNIAENVNGSYILYEPSYMNVSLDFVLSFEFVETADSTRGPLLNAMEISKYVWIASKTDRQDSTVVNALQSASAESLQMNEGDPCVPTPWEWINCSATTPPRISKIVLSRRNVTGEIPPELNNMDALTELWLDGNSLTGTLPDISNLINLKIVHLENNKLTGPLPSYLGSLPSLQALFIQNNSFSGEIPARLLSGKIVFSYDGNIGLYRGSKKHFKLILGVLVGVLAILLLLFLGTLVLVLWRKKSQMRQKGVSAHNSTKPSTAHSLVRGNLKDEGTTCYIALADLKEATDDFSKKIGKGSFGSVYYGRMKDGKEVAVKTMTDSSSHGNRQFVNEVALLSRIHHRNLVPLIGYCEEEYQHLLVYEYMHNGTLRDHLHEPSKQKNLDWLARLRIAEDAAKGLEYLHTGCNPSIIHRDVKTSNILIDINMRAKVSDFGLSRLAEEDLTHISSIARGTIGYLDPEYYANQQLTEKSDVYSFGVVLLELISGRKPVSPEDYGDDMNIVHWARPLIRKGDVMSMIDPCIAGNAKIESIWRVVEIAMQCVQQHGASRPRMQEVILAIQDATKIEIEAQNKVKSSSSPSTSRKPQSSRKTLLTSFLEIESPDFSSGCLPSAR 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151058g00012 787 ProSiteProfiles Protein kinase domain profile. 463 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151058g00012 787 PANTHER OS07G0107800 PROTEIN-RELATED 314 736 - -
Stsc151058g00012 787 Pfam Protein tyrosine and serine/threonine kinase 465 730 IPR001245 GO:0004672|GO:0006468
Stsc151058g00012 787 CDD STKc_IRAK 469 730 - -
Stsc151058g00012 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 584 596 IPR008271 GO:0004672|GO:0006468
Stsc151058g00012 787 Gene3D Ribonuclease Inhibitor 229 370 IPR032675 -
Stsc151058g00012 787 Pfam Malectin-like domain 2 222 IPR024788 -
Stsc151058g00012 787 MobiDBLite consensus disorder prediction 744 763 - -
Stsc151058g00012 787 SUPERFAMILY L domain-like 258 364 - -
Stsc151058g00012 787 ProSitePatterns Protein kinases ATP-binding region signature. 469 491 IPR017441 GO:0005524
Stsc151058g00012 787 SMART serkin_6 463 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151058g00012 787 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 270 360 - -
Stsc151058g00012 787 FunFam serine/threonine-protein kinase PBS1-like 434 538 - -
Stsc151058g00012 787 Gene3D Transferase(Phosphotransferase) domain 1 539 757 - -
Stsc151058g00012 787 SUPERFAMILY Protein kinase-like (PK-like) 452 730 IPR011009 -
Stsc151058g00012 787 Gene3D Phosphorylase Kinase; domain 1 425 538 - -
Stsc151058g00012 787 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 539 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151058g00012 Stsc-Chr151058 59285 63890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151058g00012 1 787 Receptor kinase-like Gene Family AT1G67720 70.038 0.0 1103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Stsc151058g00012 PK_Tyr_Ser-Thr 6.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151058g00012 - - gmx:100809222 1266.52