Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151057g00017 ATGGAGTCCAGCGCCGGCGGTATCAGCGCCGGCGTTACGGTGGTCGGATCAGATGCTCCGTCGGAATATCAGATAGCTCCCAGGGCAGAAAACCCTTCTCCGGCAGGTGGATCGGCGGCGCCAATCCCTACCCCAAATCCGACGAATCAAGGCGGTGCTCCGCCGCATCCTCCGCCACGTACGGCGGAGATGACAACTTCTCCGGCAACTATGCAGATGGAGAAGAAGAAGAGGGGGCGACCGAGGAAGTACGGTCCCGACGGGTCAGTGGTGGCGCTGTCCCCAAAGCCGATATCGTCATCGGCACCTTTGGCGTTGCCGCCGGTGATTGATTTCTCGGCGGAGGCAAAGCGCGGGAAGGTGAAGCCAGCTGGTACGGTGAGCAGAGGCAAGTTTGAGGTTGAGAATTTAGGTGAATGGGTTGCATGCTCGGTTGGTGCTAATTTCACACCCCATTTCATCACTGTGAATCCTGGGGAGGATGTTACTATGAAGGTAATATCATTTTCCCAGCAAGGCCCTCGGGCTATATGCATTATGTCAGCCAACGGTGTCATATCAAGTGTCACACTTCGTCAGCCTGATTCTTCCGGTGGCACATTGACGTACGAGGGGCGTTTCGAAATTCTGTCTCTAAGCGGCTCGTTCACGCCAAGTGAAACCGCAGGAACACGAAGCAGATCGGGTGGCATGAGCGTCGCTTTATCAGGTCCAGATGGACGAGTTATAGGCGGTGGAGTAGCTGGTCTATTGGTGGCTGCAAGTCCTGTGCAGGTAGTGGTTGGAAGCTTTCTAGCAGGGAACCAACATGAGCACAAGGCAAAAAAACCGAGACATGATACTATAGCACCAACTGTGACGCTGCCTCCGGTTGTTCCTGTCTCAACAGCTGCAACGGCCGATCCAGTTGCTATTCTGCAATCGCAGGCTTCCTTCCGTGGAGATAGTTGGTCTGCTGTGCCTGCGGATGTGAACAAGAACAAGCCGGCAGACATTAATGTGTCGCTTCCCGGAGGGTAA 1020 0.55 MESSAGGISAGVTVVGSDAPSEYQIAPRAENPSPAGGSAAPIPTPNPTNQGGAPPHPPPRTAEMTTSPATMQMEKKKRGRPRKYGPDGSVVALSPKPISSSAPLALPPVIDFSAEAKRGKVKPAGTVSRGKFEVENLGEWVACSVGANFTPHFITVNPGEDVTMKVISFSQQGPRAICIMSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFTPSETAGTRSRSGGMSVALSGPDGRVIGGGVAGLLVAASPVQVVVGSFLAGNQHEHKAKKPRHDTIAPTVTLPPVVPVSTAATADPVAILQSQASFRGDSWSAVPADVNKNKPADINVSLPGG 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151057g00017 339 MobiDBLite consensus disorder prediction 47 62 - -
Stsc151057g00017 339 FunFam AT-hook motif nuclear-localized protein 1-like 151 281 - -
Stsc151057g00017 339 Pfam Plants and Prokaryotes Conserved (PCC) domain 151 264 IPR005175 -
Stsc151057g00017 339 MobiDBLite consensus disorder prediction 19 88 - -
Stsc151057g00017 339 SUPERFAMILY AF0104/ALDC/Ptd012-like 148 267 - -
Stsc151057g00017 339 Gene3D - 151 280 - -
Stsc151057g00017 339 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 46 307 IPR039605 GO:0003680
Stsc151057g00017 339 ProSiteProfiles PPC domain profile profile. 146 289 IPR005175 -
Stsc151057g00017 339 CDD DUF296 150 264 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151057g00017 Stsc-Chr151057 134607 139683 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151057g00017 4 336 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 58.671 1.71e-121 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151057g00017 - - gmx:100794202 410.223