Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stsc151057g00005 | ATGGCTTCCGAGCATAACAACGACAACAGCACAAGCTACCAACCGTCGGAGCCGAAACCATGCGCCAACGGCTGCGGCTTCTTCGGCACCGCCGGCAACAGAAACCTCTGCTCCAAGTGCTACAGAGACCTCTGCCTTGAAGAACAGCGAGCCGCTTCAGCCAAAGTCGCCGTTGAGAAAACTCTTCTCCATGGCGGCGCTGCTTCCGTGTCCTCCCCGTTTTTGTTCACCACCGACTCACCTGTTGTTCCTCCGGCGGAGCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCGCAGCGCCTTCCAGTCCCGCGAAGCCGTCGAACCGGTGCGGGAGTTGCAAGAAGAAGGTTGGATTGACGGGTTTCGTGTGCAAGTGTGGAGCCACATTCTGCGGGGCTCACCGTTATCCAGAGAAGCACGATTGTTCGTTTGATTTCAAGGGCGTTGGGCGTGACGCGATTTCCAAGGCTAATCCTGTTGTGAAAGCAGATAAGATCGATAAGTTTTAG | 531 | 0.5405 | MASEHNNDNSTSYQPSEPKPCANGCGFFGTAGNRNLCSKCYRDLCLEEQRAASAKVAVEKTLLHGGAASVSSPFLFTTDSPVVPPAEPSSSSSSSSSSSSSSSSAAPSSPAKPSNRCGSCKKKVGLTGFVCKCGATFCGAHRYPEKHDCSFDFKGVGRDAISKANPVVKADKIDKF | 176 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stsc151057g00005 | 176 | Pfam | AN1-like Zinc finger | 117 | 153 | IPR000058 | GO:0008270 | |
| Stsc151057g00005 | 176 | SMART | A20_3 | 18 | 42 | IPR002653 | GO:0003677|GO:0008270 | |
| Stsc151057g00005 | 176 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Stsc151057g00005 | 176 | ProSiteProfiles | Zinc finger AN1-type profile. | 111 | 157 | IPR000058 | GO:0008270 | |
| Stsc151057g00005 | 176 | Pfam | A20-like zinc finger | 20 | 42 | IPR002653 | GO:0003677|GO:0008270 | |
| Stsc151057g00005 | 176 | ProSiteProfiles | Zinc finger A20-type profile. | 15 | 49 | IPR002653 | GO:0003677|GO:0008270 | |
| Stsc151057g00005 | 176 | SUPERFAMILY | AN1-like Zinc finger | 102 | 171 | IPR035896 | - | |
| Stsc151057g00005 | 176 | Gene3D | - | 1 | 62 | - | - | |
| Stsc151057g00005 | 176 | MobiDBLite | consensus disorder prediction | 81 | 118 | - | - | |
| Stsc151057g00005 | 176 | FunFam | Zinc finger AN1-type containing 6 | 90 | 172 | - | - | |
| Stsc151057g00005 | 176 | Gene3D | - | 89 | 172 | IPR035896 | - | |
| Stsc151057g00005 | 176 | PANTHER | AN1-TYPE ZINC FINGER PROTEIN | 18 | 175 | - | - | |
| Stsc151057g00005 | 176 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 21 | 60 | - | - | |
| Stsc151057g00005 | 176 | SMART | AN1_Zf_4 | 117 | 154 | IPR000058 | GO:0008270 | |
| Stsc151057g00005 | 176 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
| Stsc151057g00005 | 176 | MobiDBLite | consensus disorder prediction | 81 | 115 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Stsc151057g00005 | Stsc-Chr151057 | 37575 | 38642 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Stsc151057g00005 | 1 | 176 | C2H2 Transcription Factor Family | AT3G52800 | 41.243 | 5.03e-36 | 121 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stsc151057g00005 | - | - | adu:107472707 | 283.493 |