Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151056g00035 ATGGAAAAGTACGAGGCCGTGAAGGATTTGGGAGCTGGGAATTTTGGGGTGGCTAGGCTCATGAGGAACAAGGAGACCAAGGAGCTCGTTGCCATGAAATACATAGAGCGTGGCCACAAGATTGATGAGAATGTGGCAAGAGAGATTATCAACCACAGATCCCTTCGGCACCCAAACATAATTCGCTTCAAGGAGGTAGTCTTGACCCCCACTCATTTAGCAATAGTAATGGAGTATGCAGCCGGAGGAGAGCTCTTTGAGAGAATATGCAATGCTGGAAGGTTTAGTGAAGATGAGGCTAGATATTTCTTTCAGCAACTGATTTCTGGTGTCCATTACTGTCATGCGATGCAAATATGCCACAGGGATTTGAAGCTGGAAAATACCCTTTTAGATGGGAGCCCTGCACCTCGCCTGAAAATTTGCGACTTTGGTTATTCCAAGTCATCATTGCTCCATTCACGACCCAAATCAACTGTTGGAACTCCAGCTTATATCGCACCGGAGGTTCTTTCTAGGAGGGAGTATGATGGGAAGTTGGCTGATGTATGGTCATGTGGGGTGACTCTTTATGTCATGCTAGTTGGAGCATATCCCTTTGAGGATCAGGATGACCCTAGGAATTTTAGGAAAACAATTCAGCGTATAATGGCTGTTCAGTACAAAATCCCTGATTACGTTCACATCTCTCAAGATTGCAAACACCTTCTTTCTCGCATATTTGTCGCTAACCCATTGAGGAGAATTTCTCTTAAGGAAATCAAGAGCCACCCATGGTTTCTAAAGAACCTACCAAGGGAGCTAACTGAATCAGCTCAAGCTGCCTACTACCAGAGAGGAAACCCAAGCTTTTCTGTTCAAAGCGTGGACGAGATCATGAAAATCGTGGGAGAGGCAAGGGACCCTCCGCCGGTATCTAGGCCTGTCAAAGGTTTTGGCTGGGAAGGCGAAGAAGAAGAGGAAGTGGAAGAAGAGGTGGAGGAAGAGGAAGAGGAAGATGAGTATGACAAGAGGGTCAAGGAGGTTCATGCAAGTGGAGAATTTCACATCAGTTAA 1056 0.4593 MEKYEAVKDLGAGNFGVARLMRNKETKELVAMKYIERGHKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVHYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAVQYKIPDYVHISQDCKHLLSRIFVANPLRRISLKEIKSHPWFLKNLPRELTESAQAAYYQRGNPSFSVQSVDEIMKIVGEARDPPPVSRPVKGFGWEGEEEEEVEEEVEEEEEEDEYDKRVKEVHASGEFHIS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151056g00035 351 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151056g00035 351 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Stsc151056g00035 351 PANTHER SERINE/THREONINE KINASE 2 310 - -
Stsc151056g00035 351 MobiDBLite consensus disorder prediction 336 351 - -
Stsc151056g00035 351 FunFam Serine/threonine-protein kinase SRK2A 80 268 - -
Stsc151056g00035 351 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Stsc151056g00035 351 MobiDBLite consensus disorder prediction 316 335 - -
Stsc151056g00035 351 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Stsc151056g00035 351 CDD STKc_SnRK2 3 259 - -
Stsc151056g00035 351 SUPERFAMILY Protein kinase-like (PK-like) 2 291 IPR011009 -
Stsc151056g00035 351 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151056g00035 351 MobiDBLite consensus disorder prediction 303 351 - -
Stsc151056g00035 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Stsc151056g00035 351 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Stsc151056g00035 351 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151056g00035 Stsc-Chr151056 192279 195331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151056g00035 3 263 CBL-interacting serine-threonine protein kinases AT2G26980 41.912 8.44e-68 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Stsc151056g00035 Pkinase 4.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151056g00035 K14498 - gmx:547968 664.455