Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151056g00032 ATGGGTAGATCTCCTTGTTGTGAGAAAGAGCACACAAACAAAGGAGCTTGGACCAAAGAGGAAGATGAGCGCCTCATCAACTACATCAAGCTTCATGGAGAAGGCTGTTGGAGATCCCTTCCCAAAGCTGCAGGGTTGCTTAGGTGTGGCAAGAGTTGCAGGCTGAGATGGATAAATTACCTAAGGCCTGATCTCAAGAGAGGCAACTTCACTGACGAAGAAGACGAGCTCATCATCAACCTCCACAGCTTACTCGGTAACAAATGGTCTCTAATAGCTGCAAGGTTACCAGGAAGAACCGATAACGAGATAAAGAACTACTGGAACACCCACATAAAGCGCAAACTTTATAGCCGTGGAATTGACCCTCAAACCCATCACCCACTCAACGCTACCAAAACAATATCACCAACACTTTCGACCACTAATAATAACAATACTCCACCTACGACGGTGGTCACTACCACCACGACCACCACGAACGACGACAACAACAACAGCATCAATTTTCGGTTATTTGGTGTTGCTTGTGCCAACAACAATACAAACAAGGTTATTAATACTAACGGAACGGACCACTCATCAGGAGGCGGTGATGAAGATTCCAACAGCAGCAGCGGCGTCACAACGGAGTTAGAAGCATATCCGAATCTGAACTTGGACCTCTCCTTAGGCCTTATTCCCTCTCCTATTTCTTCCATAATGGACGCAGACAAGGCAAAACGACACCGTCAAGAAGGTGGTTATTTATTGTGTGTGTGTCAAAGTCTAGGGTTTCAAAAGAGTAATAACAACCAACCTTGTGCCTGCAATGCCAAGGCTGGTGCTGGTGCCGGTGGCGGTGCTTCGATTATTTCAGGTGCCACCGGCAAGAGTAATAATGATAATAATGTGTATAATAGATTTCAATTTGCAAGCTAA 921 0.4549 MGRSPCCEKEHTNKGAWTKEEDERLINYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTDEEDELIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRGIDPQTHHPLNATKTISPTLSTTNNNNTPPTTVVTTTTTTTNDDNNNSINFRLFGVACANNNTNKVINTNGTDHSSGGGDEDSNSSSGVTTELEAYPNLNLDLSLGLIPSPISSIMDADKAKRHRQEGGYLLCVCQSLGFQKSNNNQPCACNAKAGAGAGGGASIISGATGKSNNDNNVYNRFQFAS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151056g00032 306 FunFam MYB-related transcription factor 13 66 - -
Stsc151056g00032 306 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Stsc151056g00032 306 MobiDBLite consensus disorder prediction 121 159 - -
Stsc151056g00032 306 CDD SANT 69 112 IPR001005 -
Stsc151056g00032 306 MobiDBLite consensus disorder prediction 187 209 - -
Stsc151056g00032 306 FunFam Myb transcription factor 68 136 - -
Stsc151056g00032 306 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 202 - -
Stsc151056g00032 306 SMART sant 13 63 IPR001005 -
Stsc151056g00032 306 SMART sant 66 114 IPR001005 -
Stsc151056g00032 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Stsc151056g00032 306 CDD SANT 16 61 IPR001005 -
Stsc151056g00032 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Stsc151056g00032 306 Gene3D - 14 66 - -
Stsc151056g00032 306 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Stsc151056g00032 306 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Stsc151056g00032 306 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Stsc151056g00032 306 MobiDBLite consensus disorder prediction 125 159 - -
Stsc151056g00032 306 Gene3D - 68 147 - -
Stsc151056g00032 306 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151056g00032 Stsc-Chr151056 169994 171808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151056g00032 1 226 MYB Transcription Factor Family AT4G09460 59.031 3.41e-88 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Stsc151056g00032 Myb_DNA-binding 4.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151056g00032 K09422 - gmx:100808083 314.694