Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151055g00024 ATGAAGATCGAGGAATTGGAGGATACGGTGAGTAGTTGGGATGAAGAGAAGGGGAAGATGATGCAGATTGTGAGGGTTGATTCAAAGAGAGCATTGGTTGGAGCATTTGCGCGGGTCCTCTTTTACCCTACACTCTTGTATAATGTGCTTCGCAACAAGATTGAAACCGAGTTCAGGTGGTGGGATCAAGTTGATGAGTTTTTGTTGCTGGGCGCAGTCCCATTCCCCAAAGATGTTCCTCGCTTGAAGCAGCTTGGCGTTGGCGCTGTAATTACTCTTAATGAGCCTTATGAAACTTTGGTGCCATCATCCTTGTATCATGCTCATGGAATTGATCATTTGGTAATTCCCACAAGGGATTATCTCTTTGCCCCCTCCTGTGCAGATATCAGCCAGGCTGTGCAGTTTATTCACCAGAATGTAACTTGTGGTAAAACTACTTATGTTCACTGTAAAGCTGGGCGTGGGAGGAGTACAACAATTGTGCTTTGCTATCTGATTGAATACAAGCACATGACCCCTGCTGCTGCCCTGGAATATGTGCGGTCTCGAAGACCCAGAGTGCTGCTAGCACCATCGCAATGGAAGGCCGTTCAAAACTATAGCAAGCGCAGACCTTGTTCTTTAGCACGCTCGCCCTCATGGGATGCGGTTCTTATAACCAAAGCTGATCTTGAAGGCTATCAAAGCACTGGTAATGCTGGTATGGAGCTGGCTATTGCTTCTAAAGTGCGAAAGACTAATCCCATGATATCAAGACTATCTTGTCTGTTTGCATCCTTAAAGGCATCTGGAAATAGTGTACCCATGGCGAGGTGGTTGCCGGTTTCTGAGTCACGTGCTTGCTAA 849 0.4653 MKIEELEDTVSSWDEEKGKMMQIVRVDSKRALVGAFARVLFYPTLLYNVLRNKIETEFRWWDQVDEFLLLGAVPFPKDVPRLKQLGVGAVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYLFAPSCADISQAVQFIHQNVTCGKTTYVHCKAGRGRSTTIVLCYLIEYKHMTPAAALEYVRSRRPRVLLAPSQWKAVQNYSKRRPCSLARSPSWDAVLITKADLEGYQSTGNAGMELAIASKVRKTNPMISRLSCLFASLKASGNSVPMARWLPVSESRAC 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151055g00024 282 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311|GO:0016791
Stsc151055g00024 282 Gene3D Protein tyrosine phosphatase superfamily 60 206 IPR029021 -
Stsc151055g00024 282 ProSiteProfiles Dual specificity protein phosphatase domain profile. 60 207 IPR020422 GO:0006470|GO:0008138
Stsc151055g00024 282 Pfam Dual specificity phosphatase, catalytic domain 80 203 IPR000340 GO:0008138|GO:0016311
Stsc151055g00024 282 CDD PTPMT1 60 204 IPR044596 GO:0004721
Stsc151055g00024 282 SMART dsp_5 63 204 IPR020422 GO:0006470|GO:0008138
Stsc151055g00024 282 FunFam Dual specificity phosphatase domain protein 60 207 - -
Stsc151055g00024 282 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 203 IPR029021 -
Stsc151055g00024 282 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 128 196 IPR000387 GO:0016311|GO:0016791
Stsc151055g00024 282 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151055g00024 Stsc-Chr151055 137612 140310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151055g00024 6 271 Protein tyrosine phosphatase (PTP) family AT2G35680 50.479 1.83e-97 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151055g00024 - - gmx:100817410 474.552