Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151055g00018 ATGGGGAACAAGATCGCTCGGACGACGCAGGTGTCGGCGTCGGAGTACTACCTTCACGACCTGCCGTCCACGTACAATCTGGTGCTGAAGGAGGTCCTCGGACGGGGACGTTTCTTCAAGTCGATTCAATGCAAGCACGACGAAGGCCTCCTCCTCGTTAAGGTGTATTTCAAGCGCGGCCATTCCATCGATCTCTCCCCCTACGACCGCCGTCTCTCTCAGATCAACCACATTTTCCTCTCCATCGACCATCCTCACCTTTGGCCCTTTCAGTTTTGGCAAGAAACCGATAAAGCAGCATACCTTCTGAGGCAGTACTTTTTCCATAATTTGCATGATCGACTAAGCACTCGACCTTTTCTCAGTTTTATCGAGAAGAAATGGCTTGCTTTTCAGTTGCTTTTAGCTGTTAAGCAGAGCCACCATGAGGGGGTATGTCATGGTGATATTAAGTGCGAGAATGTGCTCATTACATCTTCCAATTGGCTTTACCTTGCTGACTTCGCATCTTTCAAGCCCACTTACATCCCCTATGATGACCCTTCAGATTTCTCTTTCTTTTTTGACACTGGTGGAAGAAGGCTCTGTTATCTAGCACCTGAGAGGTTTTATGAACATGAAGGGGAGATGCAGATGCCACAAGATGCCCCTTTAGAGCCATCCATGGATATATTTGCTGTCGGGTGTGTAATTGCAGAACTTTTTCTTGAAGGACAACCACTTTTTGAACTGTCTCAACTTCTTGCCTATCGCAGAGGGCAATATGATCCTAGCCAACATCTTGAGAAAATACCGGATCCTGGAGTCCGTAAGATGATACAACATATGATTCAGTTAGAACCTGAGTTGCGGCTTTCTGCTGAAGGCTACCTAGAGGAATATGCTGCAGTTGTATTCCCAACATATTTTTCACCATTTTTTCACGATTTTTTCTGCTGCTGGAGTCCTCTCCAACCTGATATGAGGATTTTGTTATGCCAAAGTGCTTTCCAGGAGATATTCAAACAAATGAACAATAATAACCATTCATCTGGACCCCAGCATGTGAAAGGAGATGCACCCAACTTTATATTTCCTGAAAATCTCCAAACTATGCAATCTTCTGGAGAGCTGCTTCAAGCTATCTCCAATGCATTTCAGGGAACTGATCACCCATTTCTGAAAAAGATCACTTTGAATGACTTGAGTTCATTGAAGTCTGAAGATGATAATCAATCAGATACATGTGAAATGCCTTTTTTACCGTTATCAAACAATATTATGAAATGTGAAGGCATGATTTTGATTACTTCTTTGCTCTGCTCCTGCCTGCGCAATATCAAGTTGCCTCACCTGAGGAGGGCAGCTGTACTCTTGTTGAAGGCTTCTGCCTTATACGTTGACGATGAAGACCGTTTGCAACGTGTTATCCCATATGTGATTGTAATGCTTTCAGATTCAGCTGCGATTGTGCGATGTGCTGCTTTAAAGACTTTGTGCGACATTCTGCCCTTAGTCCAAGATTTTCCACCAAGCGATGCAAAGATATTTCCTGAGTATATACTTCCAATGCTTTCTATGCTTCCTGATGATCCAGAGGAAAGTGTGAGAATATGTTATTCCAGAAACATAGCTAAGTTGGCACTAACTGGTTATGGATTCTTGATACACTCAATAAGGTTAAGCGAGGCAGGCGTCCTTGATGAATTGGGCTCACCCCAAAAACCATTAGTATCTTCTGCTCAGACCTCTGGAAAATTAAAGAGGAGGATAAAAACTGGTGTGCAACTTGAGAAGCTGAGGAAACCCATAGCCGAAGTTGTCCAGGAACTTGTTATGGGTCCAAAGCAAACACCAAATATTAGGCGAGCACTTCTTCAGGACATTGGCAGACTGGGCTGGTTCTTTGGTAGGAGACATAGTAACGACTTTCTGTTACCTCTCCTCCCTGCTTTCCTAAATGATCAGGATGAACAATTAAGGACAGTATTCTATGAAAAGCTTGTTTACGTCTGCTTTTTTGTGGGCCAAACAAGTGTAGAAAAATACCTATTGCCATACATTGAGCAGGCTTTAAGTGACAGAACAGAGGCTGTAATTGCTAAAGCCTTGGATTGTTTGACTATTCTATGCAGAAGTGGGTTCTTCCAGAAGAGGATACTGCTTGAAATGATAGAGCGCAGTTTTCCCTTATTAGGTTATCCCAGTGAATGGGTAAAACGATCAGCTGTTTCTTTTATTGCTGCTAGTAGTGAGACCTTGGGTACAGTAGATTCCTATGTTTTCCTTGCTCCTGTTATACGACCTTTCCTCCGTAGACAACCTGTAACACTTGCTTCAGAGCAAGCTCTTTTGTCATGTTTGCAACCTCCTGTCTCAAGACAGGTTTTTTATGAATTGTTGGAGAACTCAACGAGTTCAGACATGTTAGAAAGGCAGAGAAAAATATGGTATAATTCATCATCCCAATCTACACTCTGGGAAATAGATTTTCTGAAAAAGGGAATTGAGGGGTTGAACACACTGGACAATTGGGCTGACAAGCAACAAGGTCCTGGGGTTCAACAAGCTGTTGATACAAAGACCTTTTTGCATAGTGCTAGCAATATAGGGGGACATCATGATCTCCGTTCTTCAGATGTGTTACAATTTTCAGGACTTACATCACCATTTGGTAGTGGCATAAACAGTTTCATATACAACAAGTCATCAGAAGGGATACCTTTGTACTCTTTCAATGTGGACAGACTGTTAATGGGAATTCCTCCTCCAGCATCTGATTCTCCAATGCGAATGAATTCTCCTAGTCTCAGTTCATCTTCCATGCCTCATGTTAATCCTGCCAGCAATTCCTTCAATTTGGCTAGTTCAGTTCCAGCACCAAAGTTTGCTTCGGAATCTTTTAGCATCAATAGTGAACCTACACAGTTCTACAGAGTTGTACATGAGCCGGATGGCAAGGAAAATGAAACATGTGTTAATAGCACATTTCAAGATGCGAGACTGTCTAAAGCTAATTCAATTTCACTGGAAGATACAATAGCCCAAACTGATCCATCAGGATCTCCATGTCAAACATGCATTCCAGATACTGGCTGGAAGCTCCGTGGGGTGTTGGTTGCACACCTCCAGGAGCACAGTTCAGCTGTAAATGAAATAGCTATTTCCACTGATCATAGCTTATTTGTGAGTGCGTCTGATGACTCTACAGTCAAAATCTGGGATTCAAGAAAACTGGAAAAGGACATTGCTTTCAGGTCAAAGCTAACTTATCACCTGGGGGGAAGCCGAGCATTATGTGCAACAATGCTTTGGGGTTCTACACAAGTAATTGTTGGAGCTTCTGATGGACAGATTCATATGTTTTCTATTGATCATATATCTAAAGGTTTGGGAAATGTTGTTGAGAAGTATTCTGGTATTGCTGATATCACTAGAAAGGATATAAAGGAAGCTGCTATTCTCAGCCTTTTGAAGAGCCCAGTGGATAATCATGCAGTCATGTATAGCACCCAGAACGGTGGTATTCATATGTGGGATACTAGGTCAGAGTCCAATGTATGGAATCTAAAAGTTGTTCCAGAGGAGGGCTATGTTTCTTCTGTAGCTACAGGGCCCTGTGGCAATTGGGTTGTATCAGGGTCATCAAGGGGTGTCCTTACACTTTGGGATCTCAGGTTTCTTATTCCTGTGAACTCTTGGCAGTATTCTCCTGCTTGCCCTATAGAAAAGATTTCTCTCTTTCTTCCTCCTCCAAATGGCCCTCTTTCTTCGACTTTTAGGCCTCTTGTTTATGTTGCTGCTGGTTGCAATGAAGTTTCTCTTTGGAATGCGGAGAATGGCAGCTGTCACCAGGTATTGAGGTTGGCCAATTATGATAATGATGCAGAAATGTCTGATCGGCCTTGGGCACTGGGCAGACATTCAAGTAAACTAAGTTCTAAATCAAATCATAAAAGAGATGTCAATCCCAAGTACAATGTTGATGAACTAAATGAACCTCCTCCTCGTCTTCCTGGTATCCGTTCCCTACTTCCTTTGCCAGGGGGTGATTTATTGACTGGGAGCACTGATTTGAAGATACGCCGATGGGATCATTGCAGTCCGAAAAGAAGTTATTGCATTTGTGGCCCAAACTTAAAAGGAATTGGAAATGATGATTTTTATGAAACAAAATCTAGTTTTGGAGTGCAAGTTGTACAGGAGACAAAAAAACGGCCACTTACAATAAAGATAACGGCAAAGGCAGTTCTTGCTGCTGCTGCCACTGATCCTGGGGGTTGCCATCGTGATTCTATTCTTTCTCTGGCTTCTATTAAGTTAAACCAGAGACTCTTGCTATCAAGTGGTAGAGATGGAGCTATCAAGGTTTGGAAGTAA 4359 0.4265 MGNKIARTTQVSASEYYLHDLPSTYNLVLKEVLGRGRFFKSIQCKHDEGLLLVKVYFKRGHSIDLSPYDRRLSQINHIFLSIDHPHLWPFQFWQETDKAAYLLRQYFFHNLHDRLSTRPFLSFIEKKWLAFQLLLAVKQSHHEGVCHGDIKCENVLITSSNWLYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYEHEGEMQMPQDAPLEPSMDIFAVGCVIAELFLEGQPLFELSQLLAYRRGQYDPSQHLEKIPDPGVRKMIQHMIQLEPELRLSAEGYLEEYAAVVFPTYFSPFFHDFFCCWSPLQPDMRILLCQSAFQEIFKQMNNNNHSSGPQHVKGDAPNFIFPENLQTMQSSGELLQAISNAFQGTDHPFLKKITLNDLSSLKSEDDNQSDTCEMPFLPLSNNIMKCEGMILITSLLCSCLRNIKLPHLRRAAVLLLKASALYVDDEDRLQRVIPYVIVMLSDSAAIVRCAALKTLCDILPLVQDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYSRNIAKLALTGYGFLIHSIRLSEAGVLDELGSPQKPLVSSAQTSGKLKRRIKTGVQLEKLRKPIAEVVQELVMGPKQTPNIRRALLQDIGRLGWFFGRRHSNDFLLPLLPAFLNDQDEQLRTVFYEKLVYVCFFVGQTSVEKYLLPYIEQALSDRTEAVIAKALDCLTILCRSGFFQKRILLEMIERSFPLLGYPSEWVKRSAVSFIAASSETLGTVDSYVFLAPVIRPFLRRQPVTLASEQALLSCLQPPVSRQVFYELLENSTSSDMLERQRKIWYNSSSQSTLWEIDFLKKGIEGLNTLDNWADKQQGPGVQQAVDTKTFLHSASNIGGHHDLRSSDVLQFSGLTSPFGSGINSFIYNKSSEGIPLYSFNVDRLLMGIPPPASDSPMRMNSPSLSSSSMPHVNPASNSFNLASSVPAPKFASESFSINSEPTQFYRVVHEPDGKENETCVNSTFQDARLSKANSISLEDTIAQTDPSGSPCQTCIPDTGWKLRGVLVAHLQEHSSAVNEIAISTDHSLFVSASDDSTVKIWDSRKLEKDIAFRSKLTYHLGGSRALCATMLWGSTQVIVGASDGQIHMFSIDHISKGLGNVVEKYSGIADITRKDIKEAAILSLLKSPVDNHAVMYSTQNGGIHMWDTRSESNVWNLKVVPEEGYVSSVATGPCGNWVVSGSSRGVLTLWDLRFLIPVNSWQYSPACPIEKISLFLPPPNGPLSSTFRPLVYVAAGCNEVSLWNAENGSCHQVLRLANYDNDAEMSDRPWALGRHSSKLSSKSNHKRDVNPKYNVDELNEPPPRLPGIRSLLPLPGGDLLTGSTDLKIRRWDHCSPKRSYCICGPNLKGIGNDDFYETKSSFGVQVVQETKKRPLTIKITAKAVLAAAATDPGGCHRDSILSLASIKLNQRLLLSSGRDGAIKVWK 1452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151055g00018 1452 ProSiteProfiles Trp-Asp (WD) repeats profile. 1435 1452 IPR001680 GO:0005515
Stsc151055g00018 1452 SUPERFAMILY ARM repeat 369 765 IPR016024 -
Stsc151055g00018 1452 CDD STKc_Vps15 16 303 - -
Stsc151055g00018 1452 Pfam WD domain, G-beta repeat 1032 1068 IPR001680 GO:0005515
Stsc151055g00018 1452 Gene3D - 1248 1452 IPR015943 GO:0005515
Stsc151055g00018 1452 Pfam HEAT repeat 469 497 IPR000357 GO:0005515
Stsc151055g00018 1452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Stsc151055g00018 1452 Gene3D - 1013 1079 IPR015943 GO:0005515
Stsc151055g00018 1452 ProSiteProfiles Protein kinase domain profile. 27 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151055g00018 1452 ProSiteProfiles Trp-Asp (WD) repeats profile. 1185 1219 IPR001680 GO:0005515
Stsc151055g00018 1452 SUPERFAMILY Protein kinase-like (PK-like) 26 311 IPR011009 -
Stsc151055g00018 1452 SMART WD40_4 1404 1452 IPR001680 GO:0005515
Stsc151055g00018 1452 SMART WD40_4 1179 1217 IPR001680 GO:0005515
Stsc151055g00018 1452 SMART WD40_4 1324 1358 IPR001680 GO:0005515
Stsc151055g00018 1452 SMART WD40_4 1029 1068 IPR001680 GO:0005515
Stsc151055g00018 1452 SMART WD40_4 1079 1116 IPR001680 GO:0005515
Stsc151055g00018 1452 SUPERFAMILY WD40 repeat-like 1030 1452 IPR036322 GO:0005515
Stsc151055g00018 1452 MobiDBLite consensus disorder prediction 918 937 - -
Stsc151055g00018 1452 Gene3D Transferase(Phosphotransferase) domain 1 22 305 - -
Stsc151055g00018 1452 MobiDBLite consensus disorder prediction 1300 1326 - -
Stsc151055g00018 1452 Gene3D - 369 546 IPR011989 -
Stsc151055g00018 1452 FunFam Protein kinase family protein / WD-40 repeat family protein 565 776 - -
Stsc151055g00018 1452 FunFam phosphoinositide 3-kinase regulatory subunit 4-like 415 554 - -
Stsc151055g00018 1452 ProSiteProfiles Trp-Asp (WD) repeats profile. 1036 1068 IPR001680 GO:0005515
Stsc151055g00018 1452 FunFam Protein kinase family protein / WD-40 repeat family protein 24 348 - -
Stsc151055g00018 1452 Gene3D - 1080 1240 IPR015943 GO:0005515
Stsc151055g00018 1452 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 1452 IPR045162 GO:0004674|GO:0016236|GO:0045324
Stsc151055g00018 1452 Pfam Protein kinase domain 29 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151055g00018 1452 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1036 1068 - -
Stsc151055g00018 1452 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1419 1452 - -
Stsc151055g00018 1452 ProSiteProfiles HEAT repeat profile. 638 676 IPR021133 -
Stsc151055g00018 1452 MobiDBLite consensus disorder prediction 923 937 - -
Stsc151055g00018 1452 SMART serkin_6 27 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151055g00018 1452 Gene3D - 560 805 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151055g00018 Stsc-Chr151055 102283 108212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151055g00018 17 242 MAP Kinase Gene Family AT2G42880 25.424 8.53e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Stsc151055g00018 Pkinase 1.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151055g00018 K08333 - qsu:112039233 2101.25