Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151055g00016 ATGGGGGATTCTCCAAAGCATAAAATGATCCCTAACCCAGTTATACTGCAGAGCGACAACTTGACTAAGTATATACTGGAGTCGAGCGTTTTTCCACGAGAAGCAGAGGCTCTCAAGGAAATAAGGAATGCCACTGCAACCCACCCTTTGGGGTTCATGGGGGCGGCTCCAGATGCGAGTCAGCTAATGGCATTAATGTTGAAGTTGTTGAATGCAAAGAAGACAATTGAAATTGGAGTATTTACTGGATACTCTCTTCTCCTCACAGCACTTAACATCCCTGAAGATGGAAAGATTATAGCGGTGGATCCAGACAGAGAAGCTTATGAAATAGGACTTCCATCCATAAAGAAGGCTGGTGTTGAACACAAGATTGAGTTCATACAGTCTCCAGCATTACCAATTCTTGATCAACTGTTGGAAAATGAGAGCAACGAGGGTTGTTATGACTTTACGTTTGTTGATGCTGATAAAGACAATTACTGGAATTACCATGAGCGGCTTCTAAAACTGATTAGGATTGGAGGGATAATAATATATGATAACACGCTGTGGGGTGGAAGTGTTGCATGGGCGGAAGAGGATGTTCCAGCATCTAAAAGGCCACTCAGGGAAGCCCTTCTCACTTTCAACAACGCCATCTCACAAGATTCTCGCATTCAGATTGCTCTTGCTTCCGTTGGTGATGGTTTCACTATCTGCATGAGGCGTCTTTAA 717 0.4365 MGDSPKHKMIPNPVILQSDNLTKYILESSVFPREAEALKEIRNATATHPLGFMGAAPDASQLMALMLKLLNAKKTIEIGVFTGYSLLLTALNIPEDGKIIAVDPDREAYEIGLPSIKKAGVEHKIEFIQSPALPILDQLLENESNEGCYDFTFVDADKDNYWNYHERLLKLIRIGGIIIYDNTLWGGSVAWAEEDVPASKRPLREALLTFNNAISQDSRIQIALASVGDGFTICMRRL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151055g00016 238 Gene3D Vaccinia Virus protein VP39 5 237 IPR029063 -
Stsc151055g00016 238 PANTHER O-METHYLTRANSFERASE-RELATED 11 236 - -
Stsc151055g00016 238 CDD AdoMet_MTases 76 180 - -
Stsc151055g00016 238 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 14 237 IPR002935 GO:0008171
Stsc151055g00016 238 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 237 IPR029063 -
Stsc151055g00016 238 Pfam O-methyltransferase 34 236 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151055g00016 Stsc-Chr151055 94230 95112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151055g00016 15 236 Monolignol Biosynthesis Gene Families AT4G26220 62.613 4.13e-105 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151055g00016 K00588 - gmx:100792717 356.681