Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151055g00005 ATGGACGACGAAGAGCACCTCCAGCGACTCGACTCGGAGCTGGCCTCCACCAGTTCCAGCTCCGGCATTTCCTCAATCCTCAGCTTCGACGACTTGCGCGGCAGCAGCACCAGTTCCGGCGACATTTCCTCCATCAGCAGTGGCTCCGGGGAGATTCCTCCCGCCGACACCGTACTCTTGCCTCCTCTGCTCAGGCGGACTATGTCGAGTGACGTAGAGGTTGTGGTGGCGGCAACGGAAGCGGTCAGGGAGAAATGCGTGGGGAGGAAGAACAAGGGAGTGAGTTGGGGGCACACTTCCGTGATTGGGAGAAGGAAGGAGATGGAGGACGCCGTTGCCGTTATTCCCGGATTCATGTCCCGCACGTGCCATAACGTAGGCGGTTGTACGGCCCCTGACTCCCAATCCTCCGGCGAGATCTCTCCCCTTCATTTCTTCGGAGTGTACGACGGTCACGGTGGCTCTCAGGTGGCTAAATTTTGTGCAAAGCGGATGCACAATGTGATAGCAGAGGAATGGGAGCGGCAAATAGGGAGTTACAGTAGTGAATGGCAAAGAAGGTGGGAAGCCGTTTTCTCTAACGGTTTTGAAAGGACTGACAATGAGATATCATCAGATGAAGTTGCACCTGAAATGATAGGATCTACAGCCTCTGTGGTGGTTCTATCTGCTTGCCAAATTATGACATCCAACTGCGGCGACTCAAGGGTCGTTCTTTGCCGCAGGGCTCAAACAATCCCCCTCACTGTCGATCAGAAGCCTGATAGACAAGATGAACTCTTGAGGATTGAAGGAGGAGGAGGAAAAGTCATAAACTGGAATGGAGCTAGGGTGTTTGGTGTTCTTGCCATGTCCAGGGCTATAGGTGATAGGTACTTGAGGCCATGGATCATTCCAGTGCCTGAGATAACCTTCACAGCAAGAAGTGAGGAGGATGAGTGCTTAATATTGGCAAGTGATGGACTGTGGGATGTGATGACGAATGAAGAGGTTGGTGAAGTTGCGCGGCGTATTCTAAGAAGGCGACGAAGGTCCCTGTCGCTGGAGGAAATATCTCCAGCACAAGTTGTTGCAAATAGCCTGACTGAGATTGCTTATGCTAGAAATAGTAAGGATAACATTTCAATCATAGTAGTTGATCTGAAATCGAAGAGAAAACGGCAACCAAGACCTCCTTTACTTGCCCGATAA 1191 0.5147 MDDEEHLQRLDSELASTSSSSGISSILSFDDLRGSSTSSGDISSISSGSGEIPPADTVLLPPLLRRTMSSDVEVVVAATEAVREKCVGRKNKGVSWGHTSVIGRRKEMEDAVAVIPGFMSRTCHNVGGCTAPDSQSSGEISPLHFFGVYDGHGGSQVAKFCAKRMHNVIAEEWERQIGSYSSEWQRRWEAVFSNGFERTDNEISSDEVAPEMIGSTASVVVLSACQIMTSNCGDSRVVLCRRAQTIPLTVDQKPDRQDELLRIEGGGGKVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPEITFTARSEEDECLILASDGLWDVMTNEEVGEVARRILRRRRRSLSLEEISPAQVVANSLTEIAYARNSKDNISIIVVDLKSKRKRQPRPPLLAR 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151055g00005 396 MobiDBLite consensus disorder prediction 1 53 - -
Stsc151055g00005 396 Gene3D - 82 390 IPR036457 -
Stsc151055g00005 396 ProSitePatterns PPM-type phosphatase domain signature. 145 153 IPR000222 GO:0043169
Stsc151055g00005 396 SUPERFAMILY PP2C-like 88 382 IPR036457 -
Stsc151055g00005 396 CDD PP2Cc 97 381 IPR001932 -
Stsc151055g00005 396 MobiDBLite consensus disorder prediction 12 51 - -
Stsc151055g00005 396 ProSiteProfiles PPM-type phosphatase domain profile. 95 381 IPR001932 -
Stsc151055g00005 396 PANTHER PROTEIN PHOSPHATASE 77 381 IPR015655 GO:0004722|GO:0006470
Stsc151055g00005 396 SMART PP2C_4 85 379 IPR001932 -
Stsc151055g00005 396 FunFam Protein phosphatase 2C 51 88 389 - -
Stsc151055g00005 396 Pfam Protein phosphatase 2C 121 374 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151055g00005 Stsc-Chr151055 33800 39003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151055g00005 96 391 PP2C-type Phosphatase Gene Family AT4G26080 51.438 2.02e-98 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151055g00005 K14497 - gmx:100793293 603.208