Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151054g00028 ATGGCGAAAAGGCCACCGAGATTAGCTGTGCAGTATGAGAAAGATCAATCTGGTTGTATGTGGGGTTTTATCAGTATGTTTGATTTTCGCCATGGTCGCTCTACTCGCAAGATGATTGCGGATGCAAAGCGCAGCAGCAAGCATGCTGTAGGTGCTGTACCAGTACCTACCAAGAACAAGTTTGAGACATTAACCGATTTGGACGAAGAATATCAAGGCAATCTCGAAAGAGGAGAGAGTATGAGACTGATAGAGATAACCGATCCAGATAAGCCTAGTATGAAGAAACTCATAGAAGAAGAGATGTTCATCGACAGGGATGCGGTGAAGGATCTAGGTCATGCTGATCAAGTAGAGTCAAATAAATCCAGAGTAGCAAGTGAAGTTTCCCCAAAGACAGATTCCAAAAGAAAAAAGGAATCTCGAAAGAAAAGCCGTGACATGGACACCTATGAATTGAATTCGGATGCAATGCTTAAGTCTGAATTCTTGCATAATCCGCATTCAAGGCAACAGTCAAAAGATAATCTTGATTTGGACAAGATAATGGAAGACTTACGCGACGTTAAGGGTGGTTGTTCTGTGATGCATGACAATGACAGTGAAGTTAATTCACAATCAAACCAAAATTATGGTGTTTCTGAAAACCTTGCAAGGGATGCAATCCATGAATTTGTGAACCAAGTGATAGCAAACGGGAAAGATCAGGCAGAAGATGGAAAATCCAGTTGCTCACATGAACTCATGGAAGCACTTCAGGTTATAAGCTCGGATAAGGAACTGTTTGTTAGACTTCTACAAGACTCAGATTCAATTTTATTGAAACATGTTCAGGAGTTGGGGAATTCTCAGGCAACAAATGAGAATGAACACAACTCGGTTATTGGCTCCAAGCTCTCTGTAGAAGAAGACCTTGACAATCCGAAACAAGAAAAGGAGACTTTCAACCGTAAACATCTTAACTTTTTCAGGAAAAGGTCAAAGTCTCAATCAGAAAGTCCAACAAATGAAAATGGGAAAACAGAGTTTACAAATAGAATTGTCATTTTGAAGCCTGCACTAACAAGCTCACGAAGTTCGGGAAGCATCCTTGCCTCTTCTCTTGATTCTCATGATGTTGTCCACCACAAAGGTCGTTTTGTGAAAGTTAGTTCACATTTTTCTCTTACAGAGATAAAAAGGAAATTAAAACATGCCATTGGAAGGGAGAAACATGGAAATGCCGAAGGGATTTCAAGAAAGCTTCCGGATGAATGTCAAAATAAGTGGCTAGGAAGCAAAACAATTGGGAAAGACAACAATGTTGGAATGAGGTCTCCCAATAAAGACCATTTCTTCATGGAGAAAATTGCAAGACCTGTGTTTGATGTTACAAATGGAAGCAAGACCGATGCTTCAAAAGACTCCGAATTTGGTGCGGAACATGAAAATGGCAGTTCCAGACAAAGGGTTTCTAACTTATATATTGAGGCTAGGAAACATCTGTGTGAGATGCTAGATAATGGAGATGAGAACACAAACATTTCAAGTAGACATAGCCCGAAAACCCTTGGCCGAATACTATCTATTCCTGAGTTCAACTTTTCTCCCCTTGGCAGTCCCGGAAGGGATTTGGAGCAACATCTTGTGACCACAAAGACAAGATTTTCTGTCTCAGATAGACCTTTAGAGGTTAATGAGGATAATTCGTCACCCAAACAAGCAACCTTCGACGATCCTCTGGATCAGGCAACGAGCGATTCAGAAAAGCAGTCCAGCATTTGTGATGAAATCTCTAATAATGAAGTACAAGAAATTAGTTTGCAGTCCAACTTGGCATATGATCTTGGCCGTGTTGATATAGAAGAGACCCGTTCTCCTGTTATTGATGAGACAGTTACTGAAGTTAATGTAGAATCTGAAAAAGAGACAGATATTTTGCAATCATCCCCTATTCCAGTAGGATTCGTCATGGAAAAAGAACAAAATTGTGTGATCTCGGAAATTTCTGACAGTGCACAAGGTTCTTCATGTTTGAATCAGGAACTTTCAGAAGATATCCAACCATCATCTCCACCATTATCCCCTTCTCACTCATCTGTCACAAAGAAAATTGAAGAGCTAGAAAGTGTTACCGATGTGTCCGGCCGACCGAGTCCCATATCTGTTCTTGATACTCCATTCTTGGATGAGGACTCAAGTCCCGGATACTCAAGATGTCAAGCTGTTAAATTGCCAGTACGACTGCTGCAGTTTGATGAACCTGACTCTTCTTCGCCTGTGGATCAACTTGAAAGAGGAAAATACTGCTTTGAAGAGAATGAATTGATATATGATTACATTAAAGCTGTCNNNNNNNNNNATGCCTTTCATCAGACCAGATACTCGATCCTTCCTTGTTTGCTCAGATAG 2391 0.4049 MAKRPPRLAVQYEKDQSGCMWGFISMFDFRHGRSTRKMIADAKRSSKHAVGAVPVPTKNKFETLTDLDEEYQGNLERGESMRLIEITDPDKPSMKKLIEEEMFIDRDAVKDLGHADQVESNKSRVASEVSPKTDSKRKKESRKKSRDMDTYELNSDAMLKSEFLHNPHSRQQSKDNLDLDKIMEDLRDVKGGCSVMHDNDSEVNSQSNQNYGVSENLARDAIHEFVNQVIANGKDQAEDGKSSCSHELMEALQVISSDKELFVRLLQDSDSILLKHVQELGNSQATNENEHNSVIGSKLSVEEDLDNPKQEKETFNRKHLNFFRKRSKSQSESPTNENGKTEFTNRIVILKPALTSSRSSGSILASSLDSHDVVHHKGRFVKVSSHFSLTEIKRKLKHAIGREKHGNAEGISRKLPDECQNKWLGSKTIGKDNNVGMRSPNKDHFFMEKIARPVFDVTNGSKTDASKDSEFGAEHENGSSRQRVSNLYIEARKHLCEMLDNGDENTNISSRHSPKTLGRILSIPEFNFSPLGSPGRDLEQHLVTTKTRFSVSDRPLEVNEDNSSPKQATFDDPLDQATSDSEKQSSICDEISNNEVQEISLQSNLAYDLGRVDIEETRSPVIDETVTEVNVESEKETDILQSSPIPVGFVMEKEQNCVISEISDSAQGSSCLNQELSEDIQPSSPPLSPSHSSVTKKIEELESVTDVSGRPSPISVLDTPFLDEDSSPGYSRCQAVKLPVRLLQFDEPDSSSPVDQLERGKYCFEENELIYDYIKAVXXXXAFHQTRYSILPCLLR 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151054g00028 796 MobiDBLite consensus disorder prediction 283 344 - -
Stsc151054g00028 796 MobiDBLite consensus disorder prediction 114 177 - -
Stsc151054g00028 796 MobiDBLite consensus disorder prediction 302 320 - -
Stsc151054g00028 796 MobiDBLite consensus disorder prediction 327 343 - -
Stsc151054g00028 796 MobiDBLite consensus disorder prediction 670 694 - -
Stsc151054g00028 796 MobiDBLite consensus disorder prediction 129 153 - -
Stsc151054g00028 796 MobiDBLite consensus disorder prediction 554 585 - -
Stsc151054g00028 796 MobiDBLite consensus disorder prediction 458 479 - -
Stsc151054g00028 796 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 777 - -
Stsc151054g00028 796 MobiDBLite consensus disorder prediction 670 696 - -
Stsc151054g00028 796 Pfam Protein of unknown function (DUF3741) 228 271 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151054g00028 Stsc-Chr151054 202693 207610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151054g00028 1 777 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 29.686 4.55e-59 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151054g00028 - - aip:107635037 1360.51