Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151054g00020 ATGGATCAAGATGAAGCAGCTCAAATTCCCAGAAGAACTACAAGGTCTTTGGCTTCATCTTTTGCCTCCACATCTAACAATGCATCTTCTGCAAAAGTAAATGGCCTTGAACCTCTAACAATCAATGACCTTTTAGTTGGAGGGGACCCTATTAGCCTAGATGAATTGATATCTAATTTCCCTGGAAGAAGTAGCCAGATTAATGAGATAGTGCGTCTTTTGGGTCCATTGAACACTCCGGTGCTTTCTTTGTTTGTGTATGGAGGTGCTTCGACTGGAAAAACCAGTATCATTCTTCAATTAGTCCGGCATCTCAACCGGCCTCTTGTTTATTCTAGCTGCAGGACGTGTTATAATCAGCAAATCTTGTTTGAATCTATTCTAAATCAGCTGCATCTTCATAGAAGAAGTGATGCCAATGGCTATTCAAACATAAAACGCTGTGAGAGACCATCGGATTTTATTAATTTTCTTAGGGAAGCATTGACTGATGCCATAAACAATCTGAAGGAGAAGTCAGAGAAGTTGGTTTCAGGCAAGACAACGATGCAAGGGGGGATTGGAAACATGATCTACTTGGTATTTGACAATTTTCATCTTATTAGGGAGTGGGATAAGAGCTCTGCTATATTGCCCTTGCTGTATAATCTCTATGATCTGCTAAAGATGCCTGAGGTGGGTCTAATTTTTATCAGCAATACTTCTCCGGATACCTTTTACTCTTCTAACATGGGTTATGTGGAGCCTATACCTGTATACTTTCCTGATTACACAGATGCTGATATTCGCAAAATATTGTTGAGAAACCAAGCAGATTCAAAGCTGTATTCCTCATTCTTGGATGTGGCTCTAATGTCTTTCTTTAGAGTTACTAGGCAGGTTGATGAATTGTCCAATGCCTTCAAGCCACTATATGAAAAATATTCTGAAGTTGAGAACTCCAAAGAGACAAAGCAGAAGGTGAATCAAAGGAAATTGGAGCGACGGGAAGAAACCGGCAAGCTAGATTTTCACATGTCTACTAGTGCAAAGTATCTTCTTATTTCAGCATTTCTTGCTTCCCGAAATCCAGCTACTCTTGATGCTTCACTTTTTGATTCCAAAGGAGGTTCTGATAATCGAAAGCGAAAGAGGAAACCCTCTGAGAAGGTGCTTGAAGGAAAGGAAAGTTTAGAAGAGGAATTGCTAATGAAAGGACCTGGAAGTTTCCCACTGGAGAGGTTGGTAGCCATCTTTCAGTGTATTATGTCGGTCGCAGAAGATCCATCAGATGAGGACGAACAAAATGGTATCGGATTAGGAGTTGAAGGTGGCAATGGTGGGCTGATGTCTGATGTTCTCTTGCAGCTATCCAGTCTCTGCAATGCTAAATTTATATTCAAAGGAAGAAGCTGCCCAATTGAAGGCTCAGTTCGGTATCGGTCAACTATATCGGAAGACTTGGCTTTGAAGGTTGCAAGGAGCCTTAAATTCCCTCTATCAAGTTACTTGTATAAAAGAACCTAG 1506 0.4077 MDQDEAAQIPRRTTRSLASSFASTSNNASSAKVNGLEPLTINDLLVGGDPISLDELISNFPGRSSQINEIVRLLGPLNTPVLSLFVYGGASTGKTSIILQLVRHLNRPLVYSSCRTCYNQQILFESILNQLHLHRRSDANGYSNIKRCERPSDFINFLREALTDAINNLKEKSEKLVSGKTTMQGGIGNMIYLVFDNFHLIREWDKSSAILPLLYNLYDLLKMPEVGLIFISNTSPDTFYSSNMGYVEPIPVYFPDYTDADIRKILLRNQADSKLYSSFLDVALMSFFRVTRQVDELSNAFKPLYEKYSEVENSKETKQKVNQRKLERREETGKLDFHMSTSAKYLLISAFLASRNPATLDASLFDSKGGSDNRKRKRKPSEKVLEGKESLEEELLMKGPGSFPLERLVAIFQCIMSVAEDPSDEDEQNGIGLGVEGGNGGLMSDVLLQLSSLCNAKFIFKGRSCPIEGSVRYRSTISEDLALKVARSLKFPLSSYLYKRT 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151054g00020 501 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 252 497 IPR047088 -
Stsc151054g00020 501 MobiDBLite consensus disorder prediction 368 385 - -
Stsc151054g00020 501 MobiDBLite consensus disorder prediction 1 31 - -
Stsc151054g00020 501 Coils Coil 155 175 - -
Stsc151054g00020 501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 316 IPR027417 -
Stsc151054g00020 501 Gene3D - 60 242 IPR027417 -
Stsc151054g00020 501 MobiDBLite consensus disorder prediction 363 385 - -
Stsc151054g00020 501 MobiDBLite consensus disorder prediction 10 31 - -
Stsc151054g00020 501 FunFam Origin of replication complex subunit 5 60 242 - -
Stsc151054g00020 501 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 52 311 IPR020796 GO:0000808|GO:0005634|GO:0006260
Stsc151054g00020 501 Pfam AAA ATPase domain 59 229 IPR041664 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151054g00020 Stsc-Chr151054 144119 146083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151054g00020 3 500 Core DNA Replication Machinery Family AT4G29910 52.963 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151054g00020 K02607 - gmx:100784340 733.406