Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151053g00028 ATGTTCTATTTACATTATATCAGATCCATAAAGTGGTTAGAATTTGATGCAGCAACTGAGACAAGGTACCTGAATGCTAGCAATAGAGAACTATGTGCTCCTAATGAAGCTAGAGTGTCTTCTGACAATCCTGATCCCCCACCTCAGGAGAATAAGCCTCCTTCCCCACTTCTTAAGTTTACATTTCAACAACTTAAAGCTGCCACGGGAAATTTCAGACCTGATAGTATTCTTGGGGAGGGTGGTTTTGGTTATGTTTTCAAAGGATGGATTGAGGAAGATGGAACCGCCCCGGCGAAACCTGGCTCGGGGGTTACCGTGGCTGTCAAAAACTTGAAGCCAGATGGTCTTCAGGGCCATAGAGAATGGGTGGCTGAGGTTACCTTTCTCGGACAGCTTCATCATCCTAACCTTGTGAAACTTATTGGATACTGCATTGAAGATGACCAGAGGCTTCTTGTGTATGAGTTTATGACCCGGGGAAGTCTAGAGAATCATCTATTCAGAAGAACTGTACCTCTTCCATGGTCCAACAGGGTTAAGATTGCACTTGGTGCAGCAAAAGGACTGGCCTTCCTCCATAATGGTCCCGAACCGGTCATTTATAGAGATTTTAAAACATCAAACATTTTGCTCGATACGGAGTATAATGCGAAGCTTTCGGATTTTGGTCTAGCAAAAGCAGGGCCTCAAGGAGACAAGACACATGTTTCTACCAGAGTTGTTGGGACATATGGCTATGCTGCTCCGGAATATGTCATGACAGGGCACTTGACAGCGAAAAGTGATGTATATAGCTTTGGAGTTGTATTACTGGAGATCTTAACAGGAAGAAGATCAATGGACAAGAAGCGCCCGAGCGGGGAACAAAATCTTGTTTCATGGGCTAGGCCATATTTAGCTGACAAGAGAAAGCTATACCAACTGGTTGATCCTCGCTTGGAATTAAATTACTCTCTAAAAGGGGTGCAGAAAATCTCTCAGTTAGCCTACAGTTGCCTCAGTAGAGATCCAAAATGCCGTCCCAACATGGACGAAGTGGTGAAGGCTATGATGCCATTGCAAGATCTCAGTGACCTTGCAATATTGTCCTATCACTCTCGTATATCCCAGCAAGGGCGGCGAAAAAAGAAGTCGGACGGAACTCCACATCTCACCTACACACAGTCCAAGAGCATCAGGGCTTCTCCCTTGAATTCCAGCAAGCAGCATCGATGA 1218 0.4507 MFYLHYIRSIKWLEFDAATETRYLNASNRELCAPNEARVSSDNPDPPPQENKPPSPLLKFTFQQLKAATGNFRPDSILGEGGFGYVFKGWIEEDGTAPAKPGSGVTVAVKNLKPDGLQGHREWVAEVTFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTVPLPWSNRVKIALGAAKGLAFLHNGPEPVIYRDFKTSNILLDTEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVSWARPYLADKRKLYQLVDPRLELNYSLKGVQKISQLAYSCLSRDPKCRPNMDEVVKAMMPLQDLSDLAILSYHSRISQQGRRKKKSDGTPHLTYTQSKSIRASPLNSSKQHR 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151053g00028 405 Gene3D Transferase(Phosphotransferase) domain 1 158 368 - -
Stsc151053g00028 405 Pfam Protein tyrosine and serine/threonine kinase 76 350 IPR001245 GO:0004672|GO:0006468
Stsc151053g00028 405 CDD STKc_IRAK 78 354 - -
Stsc151053g00028 405 ProSiteProfiles Protein kinase domain profile. 72 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151053g00028 405 FunFam Probable serine/threonine-protein kinase PBL8 158 371 - -
Stsc151053g00028 405 ProSitePatterns Protein kinases ATP-binding region signature. 78 110 IPR017441 GO:0005524
Stsc151053g00028 405 SUPERFAMILY Protein kinase-like (PK-like) 53 352 IPR011009 -
Stsc151053g00028 405 PANTHER OS01G0588500 PROTEIN-RELATED 54 355 - -
Stsc151053g00028 405 MobiDBLite consensus disorder prediction 383 405 - -
Stsc151053g00028 405 FunFam Serine/threonine-protein kinase BIK1 40 157 - -
Stsc151053g00028 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Stsc151053g00028 405 Gene3D Phosphorylase Kinase; domain 1 40 157 - -
Stsc151053g00028 405 MobiDBLite consensus disorder prediction 369 405 - -
Stsc151053g00028 405 MobiDBLite consensus disorder prediction 36 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151053g00028 Stsc-Chr151053 176510 178889 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151053g00028 60 366 Glycoside Hydrolase AT3G07070 53.698 8.62e-111 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc151053g00028 PK_Tyr_Ser-Thr 2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151053g00028 - - aprc:113848012 731.48