Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151053g00027 ATGGTCTTCAGGGCCATAGAGAATGGGTGGTTAGTAAAATATCTGCTTTGGGCTGAGGTTACCTTTCTCGGACAGCTTCATCATCCTAACCTTGTGAAACTTATTGGATACTGCATTGAAGATGACCAGAGGCTTCTTGTGTATGAGTTTATGACCCGGGGAAGTCTAGAGAATCATCTATTCAGAAGAACTGTACCTCTTCCATGGTCCAACAGGGTTAAGATTGCACTTGGTGCAGCAAAAGGACTGGCCTTCCTCCATAATGGTCCCGAACCGGTCATTTATAGAGATTTTAAAACATCAAACATTTTGCTCGATACGGAGTATAATGCGAAGCTTTCGGATTTTGGTCTAGCAAAAGCAGGGCCTCAAGGAGACAAGACACATGTTTCTACCAGAGTTGTTGGGACATATGGCTATGCTGCTCCGGAATATGTCATGACAGGGCACTTGACAGCGAAAAGTGATGTATATAGCTTTGGAGTTGTATTACTGGAGATCTTAACAGGAAGAAGATCAATGGACAAGAAGCGCCCGAGCGGGGAACAAAATCTTGTTTCATGGGCTAGGCCATATTTAGCTGACAAGAGAAAGCTATACCAACTGGTTGATCCTCGCTTGGAATTAAATTACTCTCTAAAAGGGGTGCAGAAAATCTCTCAGTTAGCCTACAGTTGCCTCAGTAGAGATCCAAAATGCCGTCCCAACATGGACGAAGTGGTGAAGGCTATGATGCCATTGCAAGATCTCAGTGACCTTGCAATATTGTCCTATCACTCTCGTATATCCCAGCAAGGGCGGCGAAAAAAGAAGTCGGACGGAACTCCACATCTCACCTACACACAGTCCAAGAGCATCAGGGCTTCTCCCTTGAATTCCAGCAAGCAGCATCGATGA 897 0.4504 MVFRAIENGWLVKYLLWAEVTFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTVPLPWSNRVKIALGAAKGLAFLHNGPEPVIYRDFKTSNILLDTEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVSWARPYLADKRKLYQLVDPRLELNYSLKGVQKISQLAYSCLSRDPKCRPNMDEVVKAMMPLQDLSDLAILSYHSRISQQGRRKKKSDGTPHLTYTQSKSIRASPLNSSKQHR 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151053g00027 298 ProSitePatterns Serine/Threonine protein kinases active-site signature. 93 105 IPR008271 GO:0004672|GO:0006468
Stsc151053g00027 298 Pfam Protein kinase domain 17 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151053g00027 298 MobiDBLite consensus disorder prediction 276 298 - -
Stsc151053g00027 298 MobiDBLite consensus disorder prediction 262 298 - -
Stsc151053g00027 298 PANTHER OS01G0588500 PROTEIN-RELATED 17 248 - -
Stsc151053g00027 298 ProSiteProfiles Protein kinase domain profile. 1 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151053g00027 298 FunFam Probable serine/threonine-protein kinase PBL8 51 264 - -
Stsc151053g00027 298 Gene3D Phosphorylase Kinase; domain 1 12 51 - -
Stsc151053g00027 298 Gene3D Transferase(Phosphotransferase) domain 1 52 262 - -
Stsc151053g00027 298 SUPERFAMILY Protein kinase-like (PK-like) 15 245 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151053g00027 Stsc-Chr151053 176510 179503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151053g00027 8 259 Glycoside Hydrolase AT3G07070 54.688 7.08e-90 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc151053g00027 Pkinase 9.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151053g00027 - - aprc:113848012 541.576