Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151053g00026 ATGCTCATCATCATCATCATCATCATCTTCATCTTCATTCCTCCCTCCCTCTCTCCCATCTCCAACACCACCCATTCTCTTTCTTTCTCTCTTTCTTCTTCTACTACCCAGGCCTCTCTTCCAGACTCTTATGGAACCACCACATGCAAACACTTAGCTTCTTCTTCTTCTTCTCACTCAAACAAACAACACTTCTCCATGGAGATCGACAACAAGTGCGGTTGCTGGTCTCTCCTCAAACGCGGCGTTTCAGGTGCCTGCAAATCTTCTTCTGCTTCCAAACACTCCCCTAACACTATCCCTCGTACTAGTCTCGTTTATGATGCAGCAACTGAGACAAGGTACCTGAATGCTAGCAATAGAGAACTATGTGCTCCTAATGAAGCTAGAGTGTCTTCTGACAATCCTGATCCCCCACCTCAGGAGAATAAGCCTCCTTCCCCACTTCTTAAGTTTACATTTCAACAACTTAAAGCTGCCACGGGAAATTTCAGACCTGATAGTATTCTTGGGGAGGGTGGTTTTGGTTATGTTTTCAAAGGATGGATTGAGGAAGATGGAACCGCCCCGGCGAAACCTGGCTCGGGGGTTACCGTGGCTGTCAAAAACTTGAAGCCAGATGGTCTTCAGGGCCATAGAGAATGGGTGGCTGAGGTTACCTTTCTCGGACAGCTTCATCATCCTAACCTTGTGAAACTTATTGGATACTGCATTGAAGATGACCAGAGGCTTCTTGTGTATGAGTTTATGACCCGGGGAAGTCTAGAGAATCATCTATTCAGAAGAACTGTACCTCTTCCATGGTCCAACAGGGTTAAGATTGCACTTGGTGCAGCAAAAGGACTGGCCTTCCTCCATAATGGTCCCGAACCGGTCATTTATAGAGATTTTAAAACATCAAACATTTTGCTCGATACGGAGTATAATGCGAAGCTTTCGGATTTTGGTCTAGCAAAAGCAGGGCCTCAAGGAGACAAGACACATGTTTCTACCAGAGTTGTTGGGACATATGGCTATGCTGCTCCGGAATATGTCATGACAGGGCACTTGACAGCGAAAAGTGATGTATATAGCTTTGGAGTTGTATTACTGGAGATCTTAACAGGAAGAAGATCAATGGACAAGAAGCGCCCGAGCGGGGAACAAAATCTTGTTTCATGGGCTAGGCCATATTTAGCTGACAAGAGAAAGCTATACCAACTGGTTGATCCTCGCTTGGAATTAAATTACTCTCTAAAAGGGGTGCAGAAAATCTCTCAGTTAGCCTACAGTTGCCTCAGTAGAGATCCAAAATGCCGTCCCAACATGGACGAAGTGGTGAAGGCTATGATGCCATTGCAAGATCTCAGTGACCTTGCAATATTGTCCTATCACTCTCGTATATCCCAGCAAGGGCGGCGAAAAAAGAAGTCGGACGGAACTCCACATCTCACCTACACACAGTCCAAGAGCATCAGGGCTTCTCCCTTGAATTCCAGCAAGCAGCATCGATGA 1494 0.4592 MLIIIIIIIFIFIPPSLSPISNTTHSLSFSLSSSTTQASLPDSYGTTTCKHLASSSSSHSNKQHFSMEIDNKCGCWSLLKRGVSGACKSSSASKHSPNTIPRTSLVYDAATETRYLNASNRELCAPNEARVSSDNPDPPPQENKPPSPLLKFTFQQLKAATGNFRPDSILGEGGFGYVFKGWIEEDGTAPAKPGSGVTVAVKNLKPDGLQGHREWVAEVTFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTVPLPWSNRVKIALGAAKGLAFLHNGPEPVIYRDFKTSNILLDTEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVSWARPYLADKRKLYQLVDPRLELNYSLKGVQKISQLAYSCLSRDPKCRPNMDEVVKAMMPLQDLSDLAILSYHSRISQQGRRKKKSDGTPHLTYTQSKSIRASPLNSSKQHR 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151053g00026 497 MobiDBLite consensus disorder prediction 128 148 - -
Stsc151053g00026 497 FunFam Serine/threonine-protein kinase BIK1 132 249 - -
Stsc151053g00026 497 PANTHER OS01G0588500 PROTEIN-RELATED 87 447 - -
Stsc151053g00026 497 Pfam Protein tyrosine and serine/threonine kinase 168 442 IPR001245 GO:0004672|GO:0006468
Stsc151053g00026 497 ProSiteProfiles Protein kinase domain profile. 164 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151053g00026 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 292 304 IPR008271 GO:0004672|GO:0006468
Stsc151053g00026 497 Gene3D Phosphorylase Kinase; domain 1 133 249 - -
Stsc151053g00026 497 ProSitePatterns Protein kinases ATP-binding region signature. 170 202 IPR017441 GO:0005524
Stsc151053g00026 497 MobiDBLite consensus disorder prediction 475 497 - -
Stsc151053g00026 497 CDD STKc_IRAK 170 446 - -
Stsc151053g00026 497 FunFam Probable serine/threonine-protein kinase PBL8 250 463 - -
Stsc151053g00026 497 MobiDBLite consensus disorder prediction 461 497 - -
Stsc151053g00026 497 Gene3D Transferase(Phosphotransferase) domain 1 250 460 - -
Stsc151053g00026 497 SUPERFAMILY Protein kinase-like (PK-like) 145 444 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151053g00026 Stsc-Chr151053 176510 179503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151053g00026 152 443 Glycoside Hydrolase AT3G07070 55.068 3.99e-110 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc151053g00026 PK_Tyr_Ser-Thr 3.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151053g00026 - - aprc:113848012 788.489