Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc151053g00009 | ATGATGTCGAGCTGCAGCATGGATGTTGTACCTGAGCAACTGTGCTACATCCCCTGCAACTTTTGCAACATTGTTCTTGCGGTGAGCGTTCCATGCAGCAGCTTGTTTGAGATGGTAACGGTTCGATGCGGTCACTGCACGAATCTATGGTCCGTTAACATGGCTGCTGCCTTTCAATCACTCTCATGGCAAGATCTTCATCATCATCAGGGGGGTGGGCAGTGCAATCAGGATTACAGGATGATTGAGAGTAATATGAATAATATAATTATTAATGGTGGCTCTTCTTCTTCTTCATCTTCGAAATGCAACAACAATAACAACAACATTGGTAGCAGGCTTGCATCAATGCGTGCACCTACCAATCATGTTACTCATCAGGAAAGGGCTGTCAACCGCCCACCTGAAAAGAGGCAGCGCGTACCTTCTGCTTATAATCAGTTCATAAAGGAAGAGATCCAGAGGATTAAGGCTAATAATCCTGATATCAGTCACAGAGAAGCATTCAGTACAGCTGCAAAAAACTGGGCACATTTTCCTCATATTCATTTTGGGCTGATGTTGGAGAGCAACAATCAAGCTAATAAAATGGAGAATGCCACTGAGAAGCATTTGATGTCAAGGGCTGCACCTGCACTTATGAATAAATGA | 651 | 0.4378 | MMSSCSMDVVPEQLCYIPCNFCNIVLAVSVPCSSLFEMVTVRCGHCTNLWSVNMAAAFQSLSWQDLHHHQGGGQCNQDYRMIESNMNNIIINGGSSSSSSSKCNNNNNNIGSRLASMRAPTNHVTHQERAVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESNNQANKMENATEKHLMSRAAPALMNK | 216 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc151053g00009 | 216 | Gene3D | High mobility group box domain | 123 | 206 | IPR036910 | - | |
Stsc151053g00009 | 216 | CDD | HMG-box_SF | 140 | 176 | - | - | |
Stsc151053g00009 | 216 | Pfam | YABBY protein | 11 | 186 | IPR006780 | GO:0007275 | |
Stsc151053g00009 | 216 | SUPERFAMILY | HMG-box | 129 | 179 | IPR036910 | - | |
Stsc151053g00009 | 216 | PANTHER | PROTEIN YABBY 6-RELATED | 2 | 198 | IPR006780 | GO:0007275 | |
Stsc151053g00009 | 216 | FunFam | axial regulator YABBY 5-like | 124 | 182 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc151053g00009 | Stsc-Chr151053 | 71345 | 73925 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc151053g00009 | 12 | 194 | C2C2-YABBY Transcription Factor Family | AT2G26580 | 67.760 | 9.21e-79 | 231 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-YABBY | Stsc151053g00009 | YABBY | 3.6e-71 | CL0114 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc151053g00009 | K25796 | - | gmx:100804731 | 308.531 |