Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151053g00006 ATGAAGAAGGTGCGGAATAAGATCGGCAAGTATGAGGTTGGTAGAACCATCGGCGAAGGTACATTCGCCAAGGTCAAATTCGCCAAGAACACCGAAACGGGAGAAAGCGTTGCCATTAAGGTCATGGCTAAGACCACCATTCTCAAGCATAGAATGGTTGAACAGATTAAAAGAGAGATATCCATTATGAAGATTGTTAGACATCCAAATATAGTTAGGTTGCATGAGGTTTTGGCCAGCAAGACCAAGATCTACATAATTCTTGAGTTCGTAATGGGAGGGGAATTGTATGATAAAATTGTTCAGCAGGGAAAGCTTTCTGAAAATGAATCTAGGCGCTACTTTCAACAACTTATCGATGCTGTTGCTCATTGTCACAAGAAGGGTGTGTACCACAGAGACTTGAAGCCCGAAAACCTTCTTCTTGATGCGTTCGGAAATTTAAAAGTTTCTGACTTCGGATTGAGTGCATTGACAAAGCAGGGTGTTGATGTTCTCCACACGACATGTGGGACCCCAAATTATGTTGCACCTGAGGTGCTAGGCAATCAAGGTTATGATGGTGCAGCAGCTGATGTTTGGTCATGTGGAGTAATCCTGTATGTTCTGATGGCTGGATATCTTCCTTTTGAGGAGGCAGACCTTCCTGCACTTTACAACAGGATCAATGCTGCCGAGTTTGTTTGTCCATTCTGGTTTTCTGCTGGGGCAAAGACATTGATACATAAAATTCTGGATCCTAATCCTAAAACACGGATGAAAATTGAAGAATTAAGGAAAGATCCATGGTTCAGGAGAAACTATCTTCCGGTCAAACTTAGTGAAGACGTGGAAGTCAATTTGGATGATGTTCAGGCAGTTTTTAACGATATTGAGGACAAATATGTTTCTGAGCGGTCAGAAAGTACTGAGGGAGGTCCTTTGATAATGAATGCATTTGAGATGATTACCTTATCTCAAGGGTTGAATCTTTCGCCGCTATTTGACAGGCGTCAGGATTATGTGAAGCGGCAAACACGTTTTGTTTCACGTAAACCAGCAAGGGTTATAATATCATATATAGAAGCTGCTGCAGAGTCAATGGGTCTTAAGGTCCATTCTCGTAACTACAAGATGAGACTTGAAGGAGTTGCTGCAAATAACGTTGCTCAATTTGCAGTGGTCTTGGAGGTGTTTGAGGTTGCACCATCACTTTTCATGGTAGATGTTCGAAAGGCAGCTGGTGATACTCTCGATTATCACAAGTTTTACAAGAATCTCTGTGGAAAATTAGAAAGCATTATCTGGAGACCCATGGAGCCAGTTCCAGATCCCGGTATGTTTCGACAAATGACTATATGA 1341 0.4206 MKKVRNKIGKYEVGRTIGEGTFAKVKFAKNTETGESVAIKVMAKTTILKHRMVEQIKREISIMKIVRHPNIVRLHEVLASKTKIYIILEFVMGGELYDKIVQQGKLSENESRRYFQQLIDAVAHCHKKGVYHRDLKPENLLLDAFGNLKVSDFGLSALTKQGVDVLHTTCGTPNYVAPEVLGNQGYDGAAADVWSCGVILYVLMAGYLPFEEADLPALYNRINAAEFVCPFWFSAGAKTLIHKILDPNPKTRMKIEELRKDPWFRRNYLPVKLSEDVEVNLDDVQAVFNDIEDKYVSERSESTEGGPLIMNAFEMITLSQGLNLSPLFDRRQDYVKRQTRFVSRKPARVIISYIEAAAESMGLKVHSRNYKMRLEGVAANNVAQFAVVLEVFEVAPSLFMVDVRKAAGDTLDYHKFYKNLCGKLESIIWRPMEPVPDPGMFRQMTI 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151053g00006 446 FunFam Non-specific serine/threonine protein kinase 4 305 - -
Stsc151053g00006 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Stsc151053g00006 446 ProSitePatterns Protein kinases ATP-binding region signature. 17 49 IPR017441 GO:0005524
Stsc151053g00006 446 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Stsc151053g00006 446 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 415 - -
Stsc151053g00006 446 SMART serkin_6 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151053g00006 446 Gene3D Transferase(Phosphotransferase) domain 1 1 308 - -
Stsc151053g00006 446 Pfam NAF domain 307 366 IPR004041 GO:0007165
Stsc151053g00006 446 Pfam Protein kinase domain 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151053g00006 446 Gene3D Kinase associated domain 1, KA1 309 430 - -
Stsc151053g00006 446 CDD CIPK_C 311 421 - -
Stsc151053g00006 446 FunFam Non-specific serine/threonine protein kinase 2 90 - -
Stsc151053g00006 446 SUPERFAMILY Protein kinase-like (PK-like) 8 311 IPR011009 -
Stsc151053g00006 446 ProSiteProfiles Protein kinase domain profile. 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151053g00006 446 FunFam Non-specific serine/threonine protein kinase 304 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151053g00006 Stsc-Chr151053 42274 47400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151053g00006 1 372 CBL-interacting serine-threonine protein kinases AT5G35410 73.387 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Stsc151053g00006 Pkinase 4.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151053g00006 - - gmx:100811380 781.941