Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151052g00023 ATGGAGTGTGAACCCTTGCTAAGCACCTCCAACATCATCGACAACCGCGACATACAATACTTCGGACCTTCCAAATCCTTCAGCGATGTCGTAACCCTCAAGAACACCGAGATAATAGAATCCTTCACTCAACAGCAACAACCACAACCACCATTGCTGGCTTCTTCCAAGAGCAAGAAGAAACTGAGTCGTTGCAAGACTGCTCCAGCCATGATCACAATGAAAGAAATGAAGAAAAACAAAGAAGCCGAAGCTCCAAAGCCTCAAGCCAGCTCCGTGATCAGACAAGGCCTTATCTTGCTTGTTATATACCTCTCTGTTGGAGTTGCCATCTACTCCTTCAACAGGGACCGTTTCTCCGGCATTGAAACACACCCTGTCATCGATGCACTCTACTTCTGCATAGTCACCATGTGCACCATAGGCTATGGAGACATAGCTCCTCTCACCCCAGTTACAAAGGTCTTTGCTTGCGTCTTCGTCTTAGTAGGGTTTGGATTCATAGACATACTCTTAAGCGGGCTCGTCAACTATGTCTTGGATTTACAAGAAAGCACCATCCTTGCTGGCTTGCAAATGGGGTCTCCAGTTCATCAGGAACACCATGAAGCAGGGTTCTCAGCAAGGAATTACATCATTGATGTGGCAAAGGGGAGGATGAGGATAAGATTGAAGGTTGGTTTGGCTCTTGGTGTGGTTGTTCTTTGCATTGGGATTGGGGGTTTTGTGCTCTACTTTGTGGAGGGTTTGGATTGGGTTGATTCCATTTACTTGTCTGTTATGTCTGTTACAACAGTGGGTTATGGAGATAGAGCATTCAAGACTCGTCAAGGTCGCTTGTTTGCGGCTATTTGGCTCTTGTTTTCCACCTTGATGGTTGCAAGGGCGTTCTTGTATTTGGCTGAAGCTAGAATTGATAGAAGGCATAGAAGAATGGCTAAGAAGGTTTTGCATAGAGATATCACTGTTGATGATTGGCTTGCTGCTGATATCAACAACACTGGTTTCATCAGTAAGTCGGAGTATGTGATTTTCAAGCTGAAAGAGATGGGTAAAATACAGGAGCAAGATGTAATGCAAATATGTGAGCAATTCAGGAAGCTTGACCCTTCTAACTGTGGCAAGATAACTCTTCCTCATCTCTTGGAGGATAACTCATGA 1161 0.4479 MECEPLLSTSNIIDNRDIQYFGPSKSFSDVVTLKNTEIIESFTQQQQPQPPLLASSKSKKKLSRCKTAPAMITMKEMKKNKEAEAPKPQASSVIRQGLILLVIYLSVGVAIYSFNRDRFSGIETHPVIDALYFCIVTMCTIGYGDIAPLTPVTKVFACVFVLVGFGFIDILLSGLVNYVLDLQESTILAGLQMGSPVHQEHHEAGFSARNYIIDVAKGRMRIRLKVGLALGVVVLCIGIGGFVLYFVEGLDWVDSIYLSVMSVTTVGYGDRAFKTRQGRLFAAIWLLFSTLMVARAFLYLAEARIDRRHRRMAKKVLHRDITVDDWLAADINNTGFISKSEYVIFKLKEMGKIQEQDVMQICEQFRKLDPSNCGKITLPHLLEDNS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151052g00023 386 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 127 360 IPR003280 GO:0005267|GO:0016020|GO:0071805
Stsc151052g00023 386 PRINTS Two pore domain K+ channel signature 264 273 IPR003280 GO:0005267|GO:0016020|GO:0071805
Stsc151052g00023 386 PRINTS Two pore domain K+ channel signature 136 164 IPR003280 GO:0005267|GO:0016020|GO:0071805
Stsc151052g00023 386 FunFam Two-pore potassium channel 3 209 323 - -
Stsc151052g00023 386 Gene3D - 70 191 - -
Stsc151052g00023 386 Gene3D - 209 326 - -
Stsc151052g00023 386 SUPERFAMILY Voltage-gated potassium channels 216 323 - -
Stsc151052g00023 386 Pfam Ion channel 233 302 IPR013099 -
Stsc151052g00023 386 Pfam Ion channel 99 179 IPR013099 -
Stsc151052g00023 386 ProSitePatterns EF-hand calcium-binding domain. 330 342 IPR018247 -
Stsc151052g00023 386 SUPERFAMILY EF-hand 326 381 IPR011992 -
Stsc151052g00023 386 SUPERFAMILY Voltage-gated potassium channels 93 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151052g00023 Stsc-Chr151052 134030 136149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151052g00023 60 384 Ion Channels AT4G01840 69.325 2.33e-159 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151052g00023 K05389 - gmx:100801488 529.635