Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151052g00022 ATGATGATGGGCAGCACCAGCATGTGTGTGACAAGAACAAAACAGAGTCTAGTTAAGCCAGCTGAGGAGACACCATTGACCACACTAGACCTATCACTTATCGATAAGATACCTGTTCTAAGGTGCGATGCAAGAACCTTGCACGTGTTCAGGCATGGCCCTGAAGCTGCAAGTGTAATAAGAGAAGCCTTGTCTAGAGCACTGGTTCCTTACTACCCTCTTGCTGGACGCCTAGTAGCTTATAAATCAGAAGAAGGGTGCCTCCAGGTTCAATGCTCCGGAGACGGTGTTTGGTTTGTGGAAGCTTCTGCTGATTGCACCCTTCAATCTGTTCATTTCTTTGATGACATTCACTCCATTCCATATCATGATCTTCTTCCTCCTGATATTCCTCAAACCCAAGGCATTGACCCCCTTGTCAAGATGCAGGTGACACAATTTGAATGTGGGGGATTTGTGATAGGGCTGGTATTCTGCCATACCATATGCGATGGCCTTGGTGCTGCTCAATTTCTCAACGCTGTGGGGGAGCTAGCTAGAGGTCTTCAGAAGCCCGCCATTAAACCGCTCTGGCACAGACACTTCGCTCCGTTACCGTCACCGTCAGTCCCTAAAGTACCACCACCAATGCCGAGCTACAAGCTAGAACATGCCAACATAGACATCCCCATGCATCGAATCAGCAACCTCAAGCAGGAATTTCTGCGGCTCACGGGACTCGCTTGCTCTTCCTTCGAGATCGTAGCCGCGGGATTATGGAGAAGCAGAGCAAGAGCCATTGATTTCGAAGCGAGCGCGGATCTGAAGCTTGTGTTCTTCGCAAACTGCCGTCAAATCTTGGAGCCCCCGCTCCCCGCTGGGTTCTACGGAAACTGTTTCTTCCCGGTGACGATAACCGCTTCGCACGAGTCGGTGAGAGAAGCATCGATCTTCGATGTGGTGAAGATGATACAAGACGCAAAGACGAAATTACCCTCGGAGTTTGGCAAGTATTTGAAGGGCGAGGGCAGTGATGATCCTTTTGCACCTCCTTTGAGCTACAGGACGCTGTTCATATCGGAGTGGGGGAGGCTGGGATTCAACAACATTGACTACGGGTGGGGTCCACCTGTACACGTGGTGCCCATACAAGGATCCAGCATAATCCCCGTGGGAATTGTGGGGTACATGCCTCTTACCATGCTCCCTAACAAAGGGATTCGTTTGATGACGTGGTGCGTGGAGCAGGATCATCGTCATGCCTTCCTCCACCAAATGCATGCTCTCATGGATATATGA 1278 0.5039 MMMGSTSMCVTRTKQSLVKPAEETPLTTLDLSLIDKIPVLRCDARTLHVFRHGPEAASVIREALSRALVPYYPLAGRLVAYKSEEGCLQVQCSGDGVWFVEASADCTLQSVHFFDDIHSIPYHDLLPPDIPQTQGIDPLVKMQVTQFECGGFVIGLVFCHTICDGLGAAQFLNAVGELARGLQKPAIKPLWHRHFAPLPSPSVPKVPPPMPSYKLEHANIDIPMHRISNLKQEFLRLTGLACSSFEIVAAGLWRSRARAIDFEASADLKLVFFANCRQILEPPLPAGFYGNCFFPVTITASHESVREASIFDVVKMIQDAKTKLPSEFGKYLKGEGSDDPFAPPLSYRTLFISEWGRLGFNNIDYGWGPPVHVVPIQGSSIIPVGIVGYMPLTMLPNKGIRLMTWCVEQDHRHAFLHQMHALMDI 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151052g00022 425 PANTHER ACYL TRANSFERASE 4 8 421 - -
Stsc151052g00022 425 Pfam Transferase family 9 376 - -
Stsc151052g00022 425 Gene3D - 6 212 IPR023213 -
Stsc151052g00022 425 Gene3D - 213 417 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151052g00022 Stsc-Chr151052 131395 132907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151052g00022 8 382 Monolignol Biosynthesis Gene Families AT5G48930 27.751 1.54e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151052g00022 - - ahf:112759019 755.747