Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151052g00008 ATGATGAGAATGAAGGTGTTTGTGATAGCCGCACTTGCTTTTGCCTCTCTAGTTTCCTTCATCTCTGCCATTCATGGATCTGAGCCTCACCTATCTTCTTTCTTTGAAGACAATGCCTTACTCTCATCACTATCAACCCAGCAGCCTTCACAGTCACAACCTCTCATGGTGCCCATTACTGTCATCAACGGAGCTGCTGCCAAAGGAGCTGTATGTTTAGATGGAACATCGCCTGGTTATCACTTTCATCCTGGATCCGGGTCAGGAGCCAATAGTTGGCTCATTCACTTAGAGGGAGGAGGATGGTGTAATACCATCAGAAATTGTGTATTTAGAAAGACAACTCGCCGTGGTTCCTTTAAATTCATGGAGAAGACACTACCATTCACCGGGATATTGAGCAATAAACCTGAAGAAAACCCTGATTTCTTTAACTGGAATAGAGTTAAGTTACGTTACTGCGATGGAGCATCTTTCACCGGAGACGGTGAAAATGAGGCTAACCAGCTTCAATTTCGAGGACAAAAAATATGGCTGGCTGCGATCGAGGAACTAATGTCCAAGGGAATGCAGAAAGCCAACCAGGCACTTTTGTCTGGATGTTCTGCAGGTGGTCTGGCATCTATAATACATTGTGACGAATTCGGAAGCATGTTTCCAAAATCTACCAAAGTGAAATGTTTAAGTGATGCAGGATTTTTTCTTGATGCAGTTGATGTATCTGGGGGGCACACACTAAGGAATATGTTTGGAGGTGTAGTTACATTACAGGAAGTACAAAAAAACCTACCAAAAAGTTGTCTCAACCAAATGGATCCAACTTCGTGCTTCTTTCCTCAGAACTTGATCCAGCATGTTCAAACTCCATTGTTTCTTCTCAATGCAGCTTATGATGCATGGCAGGTCCAAGAAAGTCTAGCCCCCCGTTCAGCTGATCCAAGTGGCTCTTGGAAAGATTGTAAAACAAATCATGCAAAGTGTAACTCATCTCAAATACAGTTCCTCCAAGATTTCAGAAATCAAATGCTAAATGATATTAAAGGCTTCTCAGGGTCATCTGCAACTGGATTGTTCATAAATTCTTGTTTTGCTCATTGCCAGTCTGAGAGACAAGATACATGGTTTGCTGATGACTCTCCACTTATTAACGACATGCCTGTGGCAATTGCTGTTGGAGACTGGTTTTTTGATCGAAAAACTATTAAAGCTATTGATTGTGCTTATCCCTGTGACACAACCTGCCATAATCTGGTCTTCAAGTGA 1263 0.4228 MMRMKVFVIAALAFASLVSFISAIHGSEPHLSSFFEDNALLSSLSTQQPSQSQPLMVPITVINGAAAKGAVCLDGTSPGYHFHPGSGSGANSWLIHLEGGGWCNTIRNCVFRKTTRRGSFKFMEKTLPFTGILSNKPEENPDFFNWNRVKLRYCDGASFTGDGENEANQLQFRGQKIWLAAIEELMSKGMQKANQALLSGCSAGGLASIIHCDEFGSMFPKSTKVKCLSDAGFFLDAVDVSGGHTLRNMFGGVVTLQEVQKNLPKSCLNQMDPTSCFFPQNLIQHVQTPLFLLNAAYDAWQVQESLAPRSADPSGSWKDCKTNHAKCNSSQIQFLQDFRNQMLNDIKGFSGSSATGLFINSCFAHCQSERQDTWFADDSPLINDMPVAIAVGDWFFDRKTIKAIDCAYPCDTTCHNLVFK 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151052g00008 420 PANTHER NOTUM-RELATED 40 416 IPR004963 GO:0016787
Stsc151052g00008 420 Pfam Pectinacetylesterase 51 400 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151052g00008 Stsc-Chr151052 27950 30976 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151052g00008 6 420 Carbohydrate Esterase AT2G46930 67.470 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151052g00008 K19882 - gmx:100785270 699.508