Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151052g00007 ATGATGAGAATGAAGGTGTTTGTGATAGCCGCACTTGCTTTTGCCTCTCTAGTTTCCTTCATCTCTGCCATTCATGGATCTGAGCCTCACCTATCTTCTTTCTTTGAAGACAATGCCTTACTCTCATCACTATCAACCCAGCAGCCTTCACAGTCACAACCTCTCATGGTGCCCATTACTGTCATCAACGGAGCTGCTGCCAAAGGAGCTGTATGTTTAGATGGAACATCGCCTGGTTATCACTTTCATCCTGGATCCGGGTCAGGAGCCAATAGTTGGCTCATTCACTTAGAGGGAGGAGGATGGTGTAATACCATCAGAAATTGTGTATTTAGAAAGACAACTCGCCGTGGTTCCTTTAAATTCATGGAGAAGACACTACCATTCACCGGGATATTGAGCAATAAACCTGAAGAAAACCCTGATTTCTTTAACTGGAATAGAGTTAAGTTACGTTACTGCGATGGAGCATCTTTCACCGGAGACGGTGAAAATGAGGCTAACCAGCTTCAATTTCGAGGACAAAAAATATGGCTGGCTGCGATCGAGGAACTAATGTCCAAGGGAATGCAGAAAGCCAACCAGGCACTTTTGTCTGGATGTTCTGCAGGTGGTCTGGCATCTATAATACATTGTGACGAATTCGGAAGCATGTTTCCAAAATCTACCAAAGTGAAATGTTTAAGTGATGCAGGATTTTTTCTTGATGCAGTTGATGTATCTGGGGGGCACACACTAAGGAATATGTTTGGAGGTGTAGTTACATTACAGGAAGTACAAAAAAACCTACCAAAAAGTTGTCTCAACCAAATGGATCCAACTTCGTGCTTCTTTCCTCAGAACTTGATCCAGCATGTTCAAACTCCATTGTTTCTTCTCAATGCAGCTTATGATGCATGGCAGGTCCAAGAAAGTCTAGCCCCCCGTTCAGCTGATCCAAGTGGCTCTTGGAAAGATTGTAAAACAAATCATGCAAAGTGTAACTCATCTCAAATACAGTTCCTCCAAGATTTCAGAAATCAAATGCTAAATGATATTAAAGGCTTCTCAGGGTCATCTGCAACTGGATTGTTCATAAATTCTTGTTTTGCTCATTGCCAGTCTGAGAGACAAGATACATGGTTTGCTGATGACTCTCCACTTATTAACGACATGCCTGTGGCAATTGCTGTTGGAGACTGGTTTTTTGATCGAAAAACTATTAAAGCTATTGATTGTGCTTATCCCTGTGACACAACCTGCCATAATCTGGTCTTCAATGTTGGTAGATCTACTGTGGTTGACTCCCAGTCTATAAGTGAAGGTTATGATGACACATCCACCACCACCATGATATACTCCTCTCAGTCCTCCAGGTTGACTTTTACTGCTCTATACCTGCTAAGTGCTTTGTTTCCCACTTACATGTTCCTAGTGCACCTTAGAGTNNNNNNNNNNTATTATCAAGATTCTTTAGCCATTCCACATAATTGGGAAGTTTCCTTTAAATATGCTTCAATCAGCACCAACTATCAACTCTCCAATTCCCCGTTAAATCAAGAACAACCTGTAATTGTAAATTGTAACTGTATTATCAGTAGGCACTAG 1587 0.414 MMRMKVFVIAALAFASLVSFISAIHGSEPHLSSFFEDNALLSSLSTQQPSQSQPLMVPITVINGAAAKGAVCLDGTSPGYHFHPGSGSGANSWLIHLEGGGWCNTIRNCVFRKTTRRGSFKFMEKTLPFTGILSNKPEENPDFFNWNRVKLRYCDGASFTGDGENEANQLQFRGQKIWLAAIEELMSKGMQKANQALLSGCSAGGLASIIHCDEFGSMFPKSTKVKCLSDAGFFLDAVDVSGGHTLRNMFGGVVTLQEVQKNLPKSCLNQMDPTSCFFPQNLIQHVQTPLFLLNAAYDAWQVQESLAPRSADPSGSWKDCKTNHAKCNSSQIQFLQDFRNQMLNDIKGFSGSSATGLFINSCFAHCQSERQDTWFADDSPLINDMPVAIAVGDWFFDRKTIKAIDCAYPCDTTCHNLVFNVGRSTVVDSQSISEGYDDTSTTTMIYSSQSSRLTFTALYLLSALFPTYMFLVHLRVXXXYYQDSLAIPHNWEVSFKYASISTNYQLSNSPLNQEQPVIVNCNCIISRH 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151052g00007 528 PANTHER NOTUM-RELATED 40 416 IPR004963 GO:0016787
Stsc151052g00007 528 Pfam Pectinacetylesterase 51 400 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151052g00007 Stsc-Chr151052 27950 32163 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151052g00007 6 420 Carbohydrate Esterase AT2G46930 67.229 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151052g00007 K19882 - gmx:100785270 737.643