Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151052g00006 ATGGAAGCGGTTTTCGGGAGAGAAGAAGTGACGGACGAGATTGTACAGTACACGTGCGAGGTTGACGAGTTATACGTCCCAAAGGTTGGAATGTGTTTTGAAAGCGTCGAGGATGTTGGACTATTTTACAAAGAGTATGCCAAACGAGCAGGTTTCTCTACAAAGATAAGGAACTCAGATAGATGTAAGGACACCAAGGAAATAAAGAACCAACTTATCACTTGTACTAGAGAAGGGAGATGGACTTCCGAAGTTTCTTCCTTAAAGAAGACGAATCCGATACGTAGTGCAAATTGTCTAGCACGAATTTATGTTCATATAGACAAGAAGACTCGACATTGA 342 0.4152 MEAVFGREEVTDEIVQYTCEVDELYVPKVGMCFESVEDVGLFYKEYAKRAGFSTKIRNSDRCKDTKEIKNQLITCTREGRWTSEVSSLKKTNPIRSANCLARIYVHIDKKTRH 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151052g00006 113 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 9 109 - -
Stsc151052g00006 113 Pfam FAR1 DNA-binding domain 42 111 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151052g00006 Stsc-Chr151052 23689 24404 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc151052g00006 FAR1 1.8e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151052g00006 - - adu:107484182 114.39