Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151052g00002 ATGGAGATTGATCTCCTTTCAACATATTTTGCAGTGAAGCATGTTGGTCCTGGGATTTTGAGCATGACAAATGCTGGTCCTAACACCAATGGCAGTCAATTTTTTATTTGCCCCGTAAAAGAATTGATACAGACTCCTTGGCTAGACATTCCCCACGTGGTATTTGGACACGTCATTGATAGAATAGACGTGGTGAAGATGCTTGAATCCCAAGAGACAAGTAGAATGCATATCCCTAAAAAGCCTTGCAGAATTTTAACTATGGCCAACTTCCTGTTGATGGTTGATTCTTATGAGGAATTTTGGCACCTTTATCCGAATGCCAGTAGTCATTAG 336 0.4077 MEIDLLSTYFAVKHVGPGILSMTNAGPNTNGSQFFICPVKELIQTPWLDIPHVVFGHVIDRIDVVKMLESQETSRMHIPKKPCRILTMANFLLMVDSYEEFWHLYPNASSH 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151052g00002 111 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 88 IPR002130 GO:0000413|GO:0003755
Stsc151052g00002 111 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 90 IPR002130 GO:0000413|GO:0003755
Stsc151052g00002 111 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 10 86 - -
Stsc151052g00002 111 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 33 45 IPR002130 GO:0000413|GO:0003755
Stsc151052g00002 111 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 18 33 IPR002130 GO:0000413|GO:0003755
Stsc151052g00002 111 SUPERFAMILY Cyclophilin-like 9 90 IPR029000 -
Stsc151052g00002 111 Gene3D - 4 92 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151052g00002 Stsc-Chr151052 8501 9194 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151052g00002 14 92 U-box Gene Family AT5G67530 31.646 5.09e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151052g00002 K03768 - gmx:100785805 124.405