Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151052g00001 ATGTACCCCGAATATGGCTCCTCCTCCGACGACGACGACCAGCCGCACTCACCTGCTCGCAAGAGACAACGTGGCAACTTTCGAGCTGCACCACTGCCGCCGCCCCTCGACTTCGACGGCGCCTATTTCCAATCCTACTCCCTCTTAAGTCCTCACGAGGAGATTATCAAGGATTCTGTGCTGATAAACACGTACAAGAAAGCAATCATGCATCACCGGGCCAATATAGAAGGCAAGGTGGTACTTGATGTTGGATGCGGTACCGGGTTAATTGCTATGTTTTGTGCTCAGGCTGGTGCAAGGAAGGATGTTGAAATCCCTGGCAAGGTGGATGTTATAATTTCAGAATGGATGGGCAATATGCTTTTCTGTGAGAACATGCTTTCAAGTATCATCACTGCCAAAGAACGCTGGCTCAAAACTGGAGGTGTAATTCTTCCTTCAAGTGCAACGTTGTACATGGCACCTTTCACCAATCCTAAACGACACCGTGAAGTCGTTGAGTTATGGCGGGGTGACTTTTATGGAATTGATAGGGCATACATTGAAAGAATCAAGCCAGAAAATCTTTTGACATGCCATCACGTGCAAGTCCTTGATGTGCTATATGTTTCCCTGAACAACTTTGGATTTCAAATGCCTGGGAGCTTGAATATCAAGGACAACAACTAA 672 0.4688 MYPEYGSSSDDDDQPHSPARKRQRGNFRAAPLPPPLDFDGAYFQSYSLLSPHEEIIKDSVLINTYKKAIMHHRANIEGKVVLDVGCGTGLIAMFCAQAGARKDVEIPGKVDVIISEWMGNMLFCENMLSSIITAKERWLKTGGVILPSSATLYMAPFTNPKRHREVVELWRGDFYGIDRAYIERIKPENLLTCHHVQVLDVLYVSLNNFGFQMPGSLNIKDNN 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151052g00001 223 Gene3D Vaccinia Virus protein VP39 36 102 IPR029063 -
Stsc151052g00001 223 MobiDBLite consensus disorder prediction 1 33 - -
Stsc151052g00001 223 Gene3D Vaccinia Virus protein VP39 103 147 IPR029063 -
Stsc151052g00001 223 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 45 190 IPR029063 -
Stsc151052g00001 223 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 34 102 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151052g00001 Stsc-Chr151052 2017 5326 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151052g00001 42 182 C2H2 Transcription Factor Family AT3G12270 33.155 2.79e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151052g00001 K11437 - twl:119998242 187.578